RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 KLK7P49862 253 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 TRPC3Q13507 836 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 EPC2Q52LR7 807 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 FIGNQ5HY92 759 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CNKSR3Q6P9H4 555 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM65Q6PJ69 517 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 SLC24A5Q71RS6 500 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CACNA2D4Q7Z3S7 1137 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 DEFB128Q7Z7B8 93 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 MRPL10Q7Z7H8 261 aaKnown RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CNGA4Q8IV77 575 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM199Q8N511 208 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 ZNF397Q8NF99 534 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 DBF4BQ8NFT6 615 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 BEST2Q8NFU1 509 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 OR5B17Q8NGF7 314 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 NT5C1BQ96P26 610 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 HTATIP2Q9BUP3 242 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 TSPYL2Q9H2G4 693 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RSAD1Q9HA92 442 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 UBN1Q9NPG3 1134 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 PLCB1Q9NQ66 1216 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RGS18Q9NS28 235 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CEP72Q9P209 647 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 UBQLN1Q9UMX0 589 aaKnown RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 GIT1Q9Y2X7 761 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 COQ4Q9Y3A0 265 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
CSMD1-208ENST00000520561 KIAA0100Q14667 2235 aaKnown RBP9.67□□□□□ -0.86
CSMD1-208ENST00000520561 CITO14578 2027 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 ANK1P16157 1881 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 A0A1W2PQJ5 194 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 C9IYK1 514 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 AKR1B15C9JRZ8 316 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 NRDCO43847 1150 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 MFAP3LO75121 409 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 ZC3H11AO75152 810 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 C4BPAP04003 597 aaKnown RBP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 GYPCP04921 128 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 KRT19P08727 400 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 MLH1P40692 756 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 POLR2FP61218 127 aaKnown RBP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 NCOA4Q13772 614 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 GLRA4Q5JXX5 417 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 TDRD10Q5VZ19 366 aaKnown RBP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 C15orf39Q6ZRI6 1047 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 TRAPPC11Q7Z392 1133 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 TAS1R2Q8TE23 839 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 CPLX3Q8WVH0 158 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 LINC01599Q8WXQ3 324 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM44Q96DX7 344 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-208ENST00000520561 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 FAM81BQ96LP2 452 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 EDEM3Q9BZQ6 932 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 GANQ9H2C0 597 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 RNF39Q9H2S5 420 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 KLK14Q9P0G3 267 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 APEX2Q9UBZ4 518 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 ITGA11Q9UKX5 1188 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM43BA6NCK2 446 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 HOXA2O43364 376 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 EOMESO95936 686 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ITGB3P05106 788 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ACTN1P12814 892 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 UCHL3P15374 230 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 KCNE1P15382 129 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 SLC9A1P19634 815 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 CASP14P31944 242 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 NOP14P78316 857 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 RBP5P82980 135 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ZBED6P86452 979 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 LRMPQ12912 555 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 TBX2Q13207 712 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 PPIGQ13427 754 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 RAPGEF1Q13905 1077 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 GPNMBQ14956 572 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ZNF699Q32M78 642 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 XKR4Q5GH76 650 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 KLHDC7AQ5VTJ3 777 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 GLB1LQ6UWU2 654 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 AGMOQ6ZNB7 445 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ZNF598Q86UK7 904 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 C7orf61Q8IZ16 206 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 RPUSD2Q8IZ73 545 aaKnown RBP9.65□□□□□ -0.86
CSMD1-208ENST00000520561 ABI1Q8IZP0 508 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 C1orf127Q8N9H9 656 aa9.65□□□□□ -0.86
CSMD1-208ENST00000520561 URGCPQ8TCY9 931 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms