RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 FRMD3A2A2Y4 597 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ARL5CA6NH57 179 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 MYMKA6NI61 221 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZNF233A6NK53 670 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 C5orf67F2Z3F1 127 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZBTB39O15060 712 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 EXOC3O60645 756 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZC3H11AO75152 810 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TADA2AO75478 443 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 RHOBTB3O94955 611 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 GNA14O95837 355 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 C1RP00736 705 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 URODP06132 367 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TMEM191BP0C7N4 346 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 HARSP12081 509 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CYP3A5P20815 502 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CA8P35219 290 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 BMPR1AP36894 532 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZNF165P49910 485 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 EPHB4P54760 987 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 GSDMDP57764 484 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 DEFB103AP81534 67 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ENPEPQ07075 957 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TUSC3Q13454 348 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 DRP2Q13474 957 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 SMC1AQ14683 1233 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 IQCB1Q15051 598 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ECM1Q16610 540 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 KNOP1Q1ED39 458 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 PUS10Q3MIT2 529 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 PAN2Q504Q3 1202 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 FBXO38Q6PIJ6 1188 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 C16orf59Q7L2K0 433 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 KCNK18Q7Z418 384 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 LUZP1Q86V48 1076 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 METTL23Q86XA0 190 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 LRRC8AQ8IWT6 810 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 GPR65Q8IYL9 337 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CCAR2Q8N163 923 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TTC39CQ8N584 583 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 XXYLT1Q8NBI6 393 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 APPL2Q8NEU8 664 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 HELQQ8TDG4 1101 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 NOC3LQ8WTT2 800 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ARNTL2Q8WYA1 636 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CLP1Q92989 425 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 MRPL38Q96DV4 380 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ANKRD36BP1Q96IX9 119 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ZNF668Q96K58 619 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 APOL6Q9BWW8 343 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 NKX2-4Q9H2Z4 354 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TMX1Q9H3N1 280 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 ENTPD7Q9NQZ7 604 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TLR9Q9NR96 1032 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 MRPL17Q9NRX2 175 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 TYW1Q9NV66 732 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 CXXC1Q9P0U4 656 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 IMPACTQ9P2X3 320 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 SERTAD1Q9UHV2 236 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 DSEQ9UL01 958 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 COG5Q9UP83 839 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 C2CD2Q9Y426 696 aa6.11□□□□□ -1.43
CTNNA1-220ENST00000520260 LINC01553A4QN01 128 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 SFI1A8K8P3 1242 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 H3BNC9 293 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 H7C4K7 107 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 PDXKO00764 312 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 CETN3O15182 167 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 INPPL1O15357 1258 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 ACTN4O43707 911 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 EXTL3O43909 919 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 N4BP1O75113 896 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 RECQL4O94761 1208 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 ADH1AP07327 375 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 EPB41P11171 864 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 FGFR4P22455 802 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 IGFBP4P22692 258 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 HOXA11P31270 313 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 MLH1P40692 756 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 OR1G1P47890 313 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 CCZ1BP86790 482 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 CCZ1P86791 482 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 GRIN1Q05586 938 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 MAPK7Q13164 816 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 GPM6BQ13491 265 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 TMEM132DQ14C87 1099 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 STX1AQ16623 288 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 BMT2Q1RMZ1 405 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 USP41Q3LFD5 358 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 SV2CQ496J9 727 aa6.1□□□□□ -1.43
CTNNA1-220ENST00000520260 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms