RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 LRWD1Q9UFC0 647 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 PTPRZ1P23471 2315 aaPredicted RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 SMIM28A0A1B0GU29 152 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 CCL16O15467 120 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 B3GAT3O94766 335 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 NEFLP07196 543 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 GLULP15104 373 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 LIG1P18858 919 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 PROZP22891 400 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 OR1D2P34982 312 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 GRM5P41594 1212 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 NPTX2P47972 431 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 GPC5P78333 572 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 MAPK7Q13164 816 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 ST13P5Q8NFI4 369 aaPredicted RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 IFT74Q96LB3 600 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 KIF2CQ99661 725 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 ACO2Q99798 780 aaKnown RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 CDT1Q9H211 546 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
POLB-208ENST00000520008 KIAA1024Q9UPX6 916 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 CDY1Q9Y6F8 540 aa12.96□□□□□ -0.33
POLB-208ENST00000520008 COL4A2P08572 1712 aa12.96□□□□□ -0.34
POLB-208ENST00000520008 E9PMD0 336 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 K7ERI5 159 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 MEFVO15553 781 aaPredicted RBP12.95□□□□□ -0.34
POLB-208ENST00000520008 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 XYLBO75191 536 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
POLB-208ENST00000520008 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
POLB-208ENST00000520008 IL17AQ16552 155 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 ADSSL1Q8N142 457 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
POLB-208ENST00000520008 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
POLB-208ENST00000520008 HCFC1R1Q9NWW0 138 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 KCNH3Q9ULD8 1083 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 SIT1Q9Y3P8 196 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 CITO14578 2027 aa12.95□□□□□ -0.34
POLB-208ENST00000520008 PP2D1A8MPX8 630 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 I3L4J1 428 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 ABLIM3O94929 683 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 BRCC3P46736 316 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 PEX3P56589 373 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 ROR1Q01973 937 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 PTGDRQ13258 359 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 SLC5A9Q2M3M2 681 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 KCNK18Q7Z418 384 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 MAML2Q8IZL2 1156 aaPredicted RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 ZSCAN31Q96LW9 406 aaPredicted RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 MMTAG2Q9BU76 263 aaKnown RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 FOXQ1Q9C009 403 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 CNTN3Q9P232 1028 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
POLB-208ENST00000520008 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
POLB-208ENST00000520008 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 WDR27A2RRH5 827 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 STK25O00506 426 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 LAD1O00515 517 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 HIP1RO75146 1068 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 LRRN2O75325 713 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 MCF2P10911 925 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 KCNE1P15382 129 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 PRPHP41219 470 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 FOXK2Q01167 660 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 DMP1Q13316 513 aaPredicted RBP12.93□□□□□ -0.34
POLB-208ENST00000520008 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
POLB-208ENST00000520008 ZNF568Q3ZCX4 644 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 RINT1Q6NUQ1 792 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 C1orf210Q8IVY1 113 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 ZNF461Q8TAF7 563 aa12.93□□□□□ -0.34
POLB-208ENST00000520008 NTPCRQ9BSD7 190 aaKnown RBP12.93□□□□□ -0.34
POLB-208ENST00000520008 CCDC94Q9BW85 323 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms