RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 FAM171A1Q5VUB5 890 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 DCLRE1AQ6PJP8 1040 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 GPR149Q86SP6 731 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 LINC00301Q8NCQ3 95 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 TTPALQ9BTX7 342 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 ZHX3Q9H4I2 956 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 MAN1C1Q9NR34 630 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 CNTN3Q9P232 1028 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 ANKFY1Q9P2R3 1169 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
FBXO28-204ENST00000519894 STK17AQ9UEE5 414 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 TBX20Q9UMR3 447 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
FBXO28-204ENST00000519894 CITO14578 2027 aa16.33■□□□□ 0.21
FBXO28-204ENST00000519894 K7ENM7 598 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 CLDN3O15551 220 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 B3GAT3O94766 335 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 MYBP10242 640 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 KCNE1P15382 129 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
FBXO28-204ENST00000519894 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
FBXO28-204ENST00000519894 STK38Q15208 465 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 LILRA6Q6PI73 481 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 PIK3R5Q8WYR1 880 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 BICD1Q96G01 975 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 UROC1Q96N76 676 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 RAPGEFL1Q9UHV5 662 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 VWA8A3KMH1 1905 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
FBXO28-204ENST00000519894 A0A087X0B3 334 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 MYMKA6NI61 221 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 C2CD4DB7Z1M9 353 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 TGM5O43548 720 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 TBCAO75347 108 aaKnown RBP16.32■□□□□ 0.2
FBXO28-204ENST00000519894 C1RP00736 705 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 PIGRP01833 764 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 SPATA31D3P0C874 917 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 SCP2P22307 547 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 TXLNAP40222 546 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 GTF2BQ00403 316 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 FOXD4L5Q5VV16 416 aaPredicted RBP16.32■□□□□ 0.2
FBXO28-204ENST00000519894 SPATA31D4Q6ZUB0 917 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 CMASQ8NFW8 434 aaPredicted RBP16.32■□□□□ 0.2
FBXO28-204ENST00000519894 HDAC7Q8WUI4 952 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 FOXD4L4Q8WXT5 416 aaPredicted RBP16.32■□□□□ 0.2
FBXO28-204ENST00000519894 CLSTN3Q9BQT9 956 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 NR2E1Q9Y466 385 aa16.32■□□□□ 0.2
FBXO28-204ENST00000519894 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
FBXO28-204ENST00000519894 CCDC195A0A1B0GUA6 201 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 PRR33A8MZF0 331 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 SPTLC2O15270 562 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 PPP6R2O75170 966 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 FGFR3P22607 806 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 TNFSF9P41273 254 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 MATR3P43243 847 aaKnown RBP eCLIP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 BRCC3P46736 316 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 LIG4P49917 911 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 CREMQ03060 361 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 PSMD5Q16401 504 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 ZC2HC1CQ53FD0 456 aaPredicted RBP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 CCDC73Q6ZRK6 1079 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 DDX12PQ92771 950 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 EDAQ92838 391 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 C18orf25Q96B23 403 aaPredicted RBP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 DDX27Q96GQ7 796 aaKnown RBP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 ZNF396Q96N95 335 aaPredicted RBP16.31■□□□□ 0.2
FBXO28-204ENST00000519894 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 DPP7Q9UHL4 492 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 C2orf16Q68DN1 1984 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
FBXO28-204ENST00000519894 I3L4J1 428 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 PODXLO00592 558 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 ADAM12O43184 909 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 FAM189A1O60320 539 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 RFPL2O75678 378 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 PAPLNO95428 1278 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 HSP90AA1P07900 732 aaKnown RBP16.3■□□□□ 0.2
FBXO28-204ENST00000519894 CLTAP09496 248 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
FBXO28-204ENST00000519894 CXCL8P10145 99 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
FBXO28-204ENST00000519894 ZXDAP98168 799 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 ZBTB41Q5SVQ8 909 aa16.3■□□□□ 0.2
FBXO28-204ENST00000519894 ZNF720Q7Z2F6 126 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms