RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 FKBP9P1Q75LS8 142 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SMC1BQ8NDV3 1235 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SCARB1Q8WTV0 552 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SEMA4GQ9NTN9 838 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SPTLC3Q9NUV7 552 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 CHMP5Q9NZZ3 219 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 TESQ9UGI8 421 aaKnown RBP4.26□□□□□ -1.73
CSMD3-209ENST00000519485 KCNG1Q9UIX4 513 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 TLK1Q9UKI8 766 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 UHRF1BP1Q6BDS2 1440 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 BICRAQ9NZM4 1560 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 UGGT2Q9NYU1 1516 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 A0A1W2PR48 441 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 MYADML2A6NDP7 307 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 PROP1O75360 226 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 IGLV2-14P01704 120 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 LSSP48449 732 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 CCDC173Q0VFZ6 552 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 SCAPQ12770 1279 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 MAPK7Q13164 816 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 TP53BP2Q13625 1128 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 WDR43Q15061 677 aaKnown RBP eCLIP4.25□□□□□ -1.73
CSMD3-209ENST00000519485 PDCD4Q53EL6 469 aaKnown RBP4.25□□□□□ -1.73
CSMD3-209ENST00000519485 CT47A1Q5JQC4 288 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-209ENST00000519485 FAM102AQ5T9C2 384 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-209ENST00000519485 METRNLQ641Q3 311 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 GIMAP6Q6P9H5 292 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 DDX46Q7L014 1031 aaKnown RBP4.25□□□□□ -1.73
CSMD3-209ENST00000519485 C1QL2Q7Z5L3 287 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 XYLT1Q86Y38 959 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 OR10H5Q8NGA6 315 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 DUSP26Q9BV47 211 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 C1QTNF7Q9BXJ2 289 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 TEX101Q9BY14 249 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 ZMAT4Q9H898 229 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 USP18Q9UMW8 372 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 FPGT-TNNI3KV9GXZ4 949 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 ARHGEF11O15085 1522 aa4.25□□□□□ -1.73
CSMD3-209ENST00000519485 CAMSAP2Q08AD1 1489 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 FSD2A1L4K1 749 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 GSG1L2A8MUP6 293 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 TGM5O43548 720 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 NRP2O60462 931 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 PFKMP08237 780 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 XPAP23025 273 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 HSD3B2P26439 372 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 ADCYAP1R1P41586 468 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 ZNF169Q14929 603 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 ATP13A4Q4VNC1 1196 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 SDE2Q6IQ49 451 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 SMAP1Q8IYB5 467 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 MSL3Q8N5Y2 521 aaKnown RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 UBR7Q8N806 425 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 ZNF610Q8N9Z0 462 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 C9orf106Q8NAJ2 232 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 SMG7Q92540 1137 aaKnown RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 FDXACB1Q9BRP7 624 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 CHMP4BQ9H444 224 aaKnown RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 EMC7Q9NPA0 242 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 NOC2LQ9Y3T9 749 aaKnown RBP4.24□□□□□ -1.73
CSMD3-209ENST00000519485 SNAPC4Q5SXM2 1469 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 RALGAPBQ86X10 1494 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 TEX14Q8IWB6 1497 aa4.24□□□□□ -1.73
CSMD3-209ENST00000519485 BLMP54132 1417 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-209ENST00000519485 FHOD3Q2V2M9 1422 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 KIAA1107Q9UPP5 1409 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 ABCA10Q8WWZ4 1543 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 A0A087X0B3 334 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 UNC119BA6NIH7 251 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 TBKBP1A7MCY6 615 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 ELL2O00472 640 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-209ENST00000519485 KDM1AO60341 852 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 C1QL1O75973 258 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 MATN4O95460 622 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 CFIP05156 583 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 RARRES1P49788 294 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 MXRA7P84157 204 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 MEF2AQ02078 507 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-209ENST00000519485 STRN3Q13033 797 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 TERF2Q15554 542 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 BMT2Q1RMZ1 405 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 BROXQ5VW32 411 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 ZSCAN30Q86W11 494 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 HSCBQ8IWL3 235 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 ZNF496Q96IT1 587 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-209ENST00000519485 TTC1Q99614 292 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 POLR3GLQ9BT43 218 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 ANO3Q9BYT9 981 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 MS4A5Q9H3V2 200 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 RWDD1Q9H446 243 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-209ENST00000519485 GRPEL1Q9HAV7 217 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 SPON1Q9HCB6 807 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 KMT5AQ9NQR1 393 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 RRP7BPQ9NSQ0 103 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 PARD3Q8TEW0 1356 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 GRIN2BQ13224 1484 aa4.23□□□□□ -1.73
CSMD3-209ENST00000519485 GAPVD1Q14C86 1478 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms