RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 SNX27Q96L92 541 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 MFSD14AQ96MC6 490 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 PLEKHA5Q9HAU0 1116 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 ZDHHC7Q9NXF8 308 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 CNTN3Q9P232 1028 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 TBX20Q9UMR3 447 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 C5orf42Q9H799 3197 aa20.28■□□□□ 0.84
HOXA3-203ENST00000518451 TGM5O43548 720 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 CLTAP09496 248 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 SP100P23497 879 aaPredicted RBP20.27■□□□□ 0.84
HOXA3-203ENST00000518451 PSMD5Q16401 504 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 PTPN21Q16825 1174 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 SPECC1Q5M775 1068 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 LILRA6Q6PI73 481 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 CCDC73Q6ZRK6 1079 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 TRIM67Q6ZTA4 783 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 CCDC149Q6ZUS6 474 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 SV2BQ7L1I2 683 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 LNX1Q8TBB1 728 aaPredicted RBP20.27■□□□□ 0.84
HOXA3-203ENST00000518451 STAMQ92783 540 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 ZNF396Q96N95 335 aaPredicted RBP20.27■□□□□ 0.84
HOXA3-203ENST00000518451 CDH22Q9UJ99 828 aa20.27■□□□□ 0.84
HOXA3-203ENST00000518451 C2CD4DB7Z1M9 353 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 K7ENM7 598 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 HNRNPDLO14979 420 aaKnown RBP20.26■□□□□ 0.83
HOXA3-203ENST00000518451 SPATA31D3P0C874 917 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 FGFR3P22607 806 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 PRSS55Q6UWB4 352 aaPredicted RBP20.26■□□□□ 0.83
HOXA3-203ENST00000518451 SPATA31D4Q6ZUB0 917 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 GLYCTKQ8IVS8 523 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 KREMEN2Q8NCW0 462 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 USP28Q96RU2 1077 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 PIDD1Q9HB75 910 aa20.26■□□□□ 0.83
HOXA3-203ENST00000518451 RPL17P18621 184 aaKnown RBP20.25■□□□□ 0.83
HOXA3-203ENST00000518451 SIGLEC14Q08ET2 396 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 STK38Q15208 465 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 SLC10A6Q3KNW5 377 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 ANKS3Q6ZW76 656 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 USP49Q70CQ1 688 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 BMP8AQ7Z5Y6 402 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 UBALD2Q8IYN6 164 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 LRRC15Q8TF66 581 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 TSPAN18Q96SJ8 248 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 CLSTN3Q9BQT9 956 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 SORCS3Q9UPU3 1222 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 NUB1Q9Y5A7 615 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
HOXA3-203ENST00000518451 PODXLO00592 558 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 PIGRP01833 764 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
HOXA3-203ENST00000518451 GTF2BQ00403 316 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 MTMR3Q13615 1198 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 SMG7Q92540 1137 aaKnown RBP20.24■□□□□ 0.83
HOXA3-203ENST00000518451 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
HOXA3-203ENST00000518451 PRKD2Q9BZL6 878 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 ST6GALNAC4Q9H4F1 302 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 GOLGA2P5Q9HBQ8 144 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
HOXA3-203ENST00000518451 SEL1LQ9UBV2 794 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 LIMD1Q9UGP4 676 aa20.24■□□□□ 0.83
HOXA3-203ENST00000518451 TMEM221A6NGB7 291 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 M0R296 226 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 OGTO15294 1046 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 XPOTO43592 962 aaKnown RBP20.23■□□□□ 0.83
HOXA3-203ENST00000518451 RFPL2O75678 378 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 ZMYND10O75800 440 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 PAPLNO95428 1278 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 GAP43P17677 238 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 RAB33AQ14088 237 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 SLFN12LQ6IEE8 588 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 PBXIP1Q96AQ6 731 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
HOXA3-203ENST00000518451 SYN3O14994 580 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 HNRNPA1P09651 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
HOXA3-203ENST00000518451 MYBP10242 640 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 OR1D2P34982 312 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 STAT6P42226 847 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 PPP2R3AQ06190 1150 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 SOX4Q06945 474 aaPredicted RBP20.22■□□□□ 0.83
HOXA3-203ENST00000518451 UVSSAQ2YD98 709 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 SEZ6Q53EL9 994 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 CD300LGQ6UXG3 332 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 HFE2Q6ZVN8 426 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 DYMQ7RTS9 669 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 MAP4K3Q8IVH8 894 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 CD302Q8IX05 232 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 LINC00301Q8NCQ3 95 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 DDX12PQ92771 950 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 HVCN1Q96D96 273 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 MSTO1Q9BUK6 570 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 LRRC27Q9C0I9 530 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 RPF1Q9H9Y2 349 aaKnown RBP20.22■□□□□ 0.83
HOXA3-203ENST00000518451 MTRRQ9UBK8 725 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 RAPGEFL1Q9UHV5 662 aa20.22■□□□□ 0.83
HOXA3-203ENST00000518451 A0A0B4J269 797 aa20.21■□□□□ 0.83
HOXA3-203ENST00000518451 TTC26A0AVF1 554 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms