RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 DAW1Q8N136 415 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 MAML1Q92585 1016 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
PCM1-203ENST00000517545 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 GSTTP1A0A1W2PQM5 241 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 ADRA2BP18089 450 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 PTDSS1P48651 473 aaKnown RBP13.17□□□□□ -0.3
PCM1-203ENST00000517545 CACNB3P54284 484 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 SIAH1Q8IUQ4 282 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 AGGF1Q8N302 714 aaeCLIP13.17□□□□□ -0.3
PCM1-203ENST00000517545 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
PCM1-203ENST00000517545 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 K7ENM7 598 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 C4orf33Q8N1A6 199 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
PCM1-203ENST00000517545 SEMA4DQ92854 862 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 TMEM117Q9H0C3 514 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 PIDD1Q9HB75 910 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
PCM1-203ENST00000517545 PSMD10O75832 226 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 AP1G2O75843 785 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 GAS8O95995 478 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 GCAP28676 217 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 CETN1Q12798 172 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 CAPN12Q6ZSI9 719 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 DHX38Q92620 1227 aaKnown RBP13.16□□□□□ -0.3
PCM1-203ENST00000517545 MRRFQ96E11 262 aaKnown RBP13.16□□□□□ -0.3
PCM1-203ENST00000517545 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 MAPK13O15264 365 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 SORBS3O60504 671 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 FOSP01100 380 aaPredicted RBP13.16□□□□□ -0.3
PCM1-203ENST00000517545 FGFR1P11362 822 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 CYP11B1P15538 503 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 ATP6V1C1P21283 382 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 TEX9Q8N6V9 391 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
PCM1-203ENST00000517545 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 UBE4BO95155 1302 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 RGL2O15211 777 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 SESN3P58005 492 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 TCP10Q12799 353 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 IZUMO3Q5VZ72 239 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
PCM1-203ENST00000517545 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 BMP3P12645 472 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 MAPK4P31152 587 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 RPA3P35244 121 aaPredicted RBP13.15□□□□□ -0.3
PCM1-203ENST00000517545 MXI1P50539 228 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
PCM1-203ENST00000517545 TAF1BQ53T94 588 aaPredicted RBP13.15□□□□□ -0.3
PCM1-203ENST00000517545 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 DENND1AQ8TEH3 1009 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 SH2D3AQ9BRG2 576 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 EXOC1LA0A1B0GW35 172 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 F5H6K3 240 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 ATP5HO75947 161 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 RALAP11233 206 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 STAT4Q14765 748 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
PCM1-203ENST00000517545 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCM1-203ENST00000517545 KIAA1586Q9HCI6 787 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 ACTL7BQ9Y614 415 aa13.15□□□□□ -0.3
PCM1-203ENST00000517545 MAGEB2O15479 319 aa13.14□□□□□ -0.31
PCM1-203ENST00000517545 MAGEA4P43358 317 aa13.14□□□□□ -0.31
PCM1-203ENST00000517545 MXRA7P84157 204 aa13.14□□□□□ -0.31
PCM1-203ENST00000517545 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
PCM1-203ENST00000517545 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms