RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CDC5LQ99459 802 aaKnown RBP1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 HIST1H2AJQ99878 128 aa1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 TRIM55Q9BYV6 548 aa1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 GJB4Q9NTQ9 266 aa1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 USP25Q9UHP3 1055 aa1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 COQ6Q9Y2Z9 468 aa1.32□□□□□ -2.2
SCARNA23-201ENST00000516060 TRGV11A0A075B6L2 103 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PRRT4C9JH25 899 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 E5RJQ4 531 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 MYO1FO00160 1098 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 DVL2O14641 736 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 SCAMP3O14828 347 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 ADAMTS3O15072 1205 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 GRID2O43424 1007 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 SLC28A2O43868 658 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 TBC1D4O60343 1298 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 HNRNPCP07910 306 aaKnown RBP eCLIP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 C6orf222P0C671 652 aaPredicted RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 TMEM191BP0C7N4 346 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 AZU1P20160 251 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PTPRRQ15256 657 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 TNNI3KQ59H18 835 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 MFSD14BQ5SR56 506 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 CNGA4Q8IV77 575 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 LILRB2Q8N423 598 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 GALNT16Q8N428 558 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PRSS3P2Q8NHM4 247 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 C16orf52Q8NHV5 167 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PIGOQ8TEQ8 1089 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 DDX17Q92841 729 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 FERMT2Q96AC1 680 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 ZNF428Q96B54 188 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 LMLNQ96KR4 655 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 CAMK1GQ96NX5 476 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 FDXACB1Q9BRP7 624 aaPredicted RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 BACH2Q9BYV9 841 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 CELF4Q9BZC1 486 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 REXO4Q9GZR2 422 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 TRMT13Q9NUP7 481 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PODXL2Q9NZ53 605 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 MTO1Q9Y2Z2 717 aaKnown RBP1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 PNPLA7Q6ZV29 1317 aa1.31□□□□□ -2.2
SCARNA23-201ENST00000516060 A0A1W2PR48 441 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 IQCA1LA6NCM1 817 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 PJA2O43164 708 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 SPRY2O43597 315 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 SLC24A1O60721 1099 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 BCAR3O75815 825 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 SEC24DO94855 1032 aaPredicted RBP1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 ABLIM3O94929 683 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 EYA4O95677 639 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 GCSHP23434 173 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 CDKN2AP42771 156 aaKnown RBP1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 TAF6P49848 677 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 KIF11P52732 1056 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 CLRN1P58418 232 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 KRTAP10-1P60331 282 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 DDR1Q08345 913 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 TXNRD1Q16881 649 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 TRIM71Q2Q1W2 868 aaKnown RBP1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 PRAMEF17Q5VTA0 474 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 FOXB2Q5VYV0 432 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 KIAA1841Q6NSI8 718 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 FOXR2Q6PJQ5 311 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 SHC4Q6S5L8 630 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 CATSPERGQ6ZRH7 1159 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 TSHZ1Q6ZSZ6 1077 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 OTOP1Q7RTM1 612 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 MDM1Q8TC05 714 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 COQ8BQ96D53 544 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 ZC3H10Q96K80 434 aaKnown RBP1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 ARID3AQ99856 593 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 GSTO2Q9H4Y5 243 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 MRVI1Q9Y6F6 885 aa1.3□□□□□ -2.2
SCARNA23-201ENST00000516060 TTC3P53804 2025 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 WDR27A2RRH5 827 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 CXorf49A8MYA2 514 aaPredicted RBP1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 ITGA10O75578 1167 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 PRPF6O94906 941 aaKnown RBP1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 PRSS23O95084 383 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 CRYABP02511 175 aaKnown RBP1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 CHRM2P08172 466 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 PRF1P14222 555 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 ERCC3P19447 782 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 DRD4P21917 467 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 KRT2P35908 639 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 EPHA7Q15375 998 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 ZNF326Q5BKZ1 582 aaKnown RBP1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 NME9Q86XW9 330 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 C2orf69Q8N8R5 385 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 Q8NA96 180 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 LPIN2Q92539 896 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 REPS1Q96D71 796 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 PGBD1Q96JS3 809 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 FAM84BQ96KN1 310 aaPredicted RBP1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 EXOC2Q96KP1 924 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 SLITRK1Q96PX8 696 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 MYL10Q9BUA6 226 aa1.29□□□□□ -2.2
SCARNA23-201ENST00000516060 BOCQ9BWV1 1114 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms