RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CELF4Q9BZC1 486 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HAUS4Q9H6D7 363 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LUC7LQ9NQ29 371 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 REXO2Q9Y3B8 237 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRPV2Q9Y5S1 764 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GRIN2DO15399 1336 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PCNTO95613 3336 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FOXN3O00409 490 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIF5CO60282 957 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 VNN1O95497 513 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NPTXRO95502 500 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PNMA6AP0CW24 399 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HSPA6P17066 643 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HOXA11P31270 313 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GRM5P41594 1212 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MAGEA1P43355 309 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 VAV2P52735 878 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CYP27A1Q02318 531 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GCNT1Q02742 428 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTK2Q05397 1052 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GFPT1Q06210 699 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRPC3Q13507 836 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ITGA7Q13683 1181 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NCOA4Q13772 614 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SLC18A3Q16572 532 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTGISQ16647 500 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ASTE1Q2TB18 679 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LHX8Q68G74 356 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF662Q6ZS27 426 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRAPPC11Q7Z392 1133 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RPAINQ86UA6 219 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CD302Q8IX05 232 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EFCAB13Q8IY85 973 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HELQQ8TDG4 1101 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SH3TC2Q8TF17 1288 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TMEM40Q8WWA1 233 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SHC3Q92529 594 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TATDN2Q93075 761 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 JAKMIP2Q96AA8 810 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ANKRD36BP1Q96IX9 119 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KREMEN1Q96MU8 473 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PI4K2AQ9BTU6 479 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 IFIH1Q9BYX4 1025 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRIM6Q9C030 488 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MTMR12Q9C0I1 747 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GPR88Q9GZN0 384 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ASB7Q9H672 318 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LZTFL1Q9NQ48 299 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PIN4Q9Y237 131 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NOD1Q9Y239 953 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PCDHA13Q9Y5I0 950 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CDY2AQ9Y6F7 541 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MROH7Q68CQ1 1323 aa8.23□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CENPFP49454 3210 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LACTBL1A8MY62 500 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KBTBD13C9JR72 458 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RBAK-RBAKDNI3L0D1 243 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF263O14978 683 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KRT86O43790 486 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RPS6KA5O75582 802 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CTSHP09668 335 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TBXAS1P24557 533 aaPredicted RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 THPOP40225 353 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 USP8P40818 1118 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARHGAP25P42331 645 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 YARSP54577 528 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GNG11P61952 73 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NOP14P78316 857 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIF5AQ12840 1032 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTK7Q13308 1070 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TMEM132DQ14C87 1099 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SGSM1Q2NKQ1 1148 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CCDC122Q5T0U0 273 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 C10orf76Q5T2E6 689 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF571Q7Z3V5 609 aaPredicted RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM228AQ86W67 206 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NT5DC4Q86YG4 428 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TMEM192Q8IY95 271 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM71AQ8IYT1 594 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIF18AQ8NI77 898 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KAT5Q92993 513 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TSGA10Q9BZW7 698 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SENP6Q9GZR1 1112 aaPredicted RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PLEKHA5Q9HAU0 1116 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SNTG2Q9NY99 539 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ADAMTS1Q9UHI8 967 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTPN22Q9Y2R2 807 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 R3HCC1Q9Y3T6 440 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NOC2LQ9Y3T9 749 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MYH10P35580 1976 aa8.22□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HTTP42858 3142 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms