RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 MYBP10242 640 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 KLRC2P26717 231 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 CLCNKBP51801 687 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 RBM10P98175 930 aaKnown RBP21.13■□□□□ 0.97
LMNA-225ENST00000515824 ELAVL2Q12926 359 aaKnown RBP21.13■□□□□ 0.97
LMNA-225ENST00000515824 SMAD4Q13485 552 aaKnown RBP21.13■□□□□ 0.97
LMNA-225ENST00000515824 UPP1Q16831 310 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 KIAA0319Q5VV43 1072 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 GPR65Q8IYL9 337 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 SYCP3Q8IZU3 236 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 HASPINQ8TF76 798 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 KLHL5Q96PQ7 755 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 TMEM206Q9H813 350 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 USP25Q9UHP3 1055 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 STYXL1Q9Y6J8 313 aa21.13■□□□□ 0.97
LMNA-225ENST00000515824 TTC26A0AVF1 554 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 TMEM189-UBE2V1I3L0A0 370 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 MBTPS2O43462 519 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 CNPP09543 421 aaKnown RBP21.12■□□□□ 0.97
LMNA-225ENST00000515824 SLFN14P0C7P3 912 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 CXCL8P10145 99 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 IL9P15248 144 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 PFKFB1P16118 471 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
LMNA-225ENST00000515824 TNFSF9P41273 254 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 AFMP43652 599 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 CASP5P51878 434 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 PPP2R3AQ06190 1150 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 KCNA1Q09470 495 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 ANKRD54Q6NXT1 300 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 UNC13DQ70J99 1090 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 POMGNT1Q8WZA1 660 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 GOLGA2P5Q9HBQ8 144 aa21.12■□□□□ 0.97
LMNA-225ENST00000515824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.12■□□□□ 0.97
LMNA-225ENST00000515824 AGO2Q9UKV8 859 aaKnown RBP21.12■□□□□ 0.97
LMNA-225ENST00000515824 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.12■□□□□ 0.97
LMNA-225ENST00000515824 A0A1W2PQ27 194 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 A0A1W2PQ64 194 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 A0A1W2PQD8 194 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 MEFVO15553 781 aaPredicted RBP21.11■□□□□ 0.97
LMNA-225ENST00000515824 TRAPPC3O43617 180 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 RPL9P32969 192 aaKnown RBP21.11■□□□□ 0.97
LMNA-225ENST00000515824 SOX4Q06945 474 aaPredicted RBP21.11■□□□□ 0.97
LMNA-225ENST00000515824 FAM171A1Q5VUB5 890 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 CD302Q8IX05 232 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 SMRP1Q8NCR6 262 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 RIN2Q8WYP3 895 aaPredicted RBP21.11■□□□□ 0.97
LMNA-225ENST00000515824 TSPAN18Q96SJ8 248 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 BLZF1Q9H2G9 400 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 RXFP1Q9HBX9 757 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 CPSF3Q9UKF6 684 aaKnown RBP21.11■□□□□ 0.97
LMNA-225ENST00000515824 HPSEQ9Y251 543 aa21.11■□□□□ 0.97
LMNA-225ENST00000515824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 LACTBL1A8MY62 500 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 TISP43B9A030 160 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 XPOTO43592 962 aaKnown RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 FAM189A1O60320 539 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 PRPF6O94906 941 aaKnown RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 ADH1AP07327 375 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 SYKP43405 635 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 ENOX2Q16206 610 aaKnown RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 TPRNQ4KMQ1 711 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 FAM26FQ5R3K3 315 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 ZBTB41Q5SVQ8 909 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 CEP57Q86XR8 500 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 SLC22A17Q8WUG5 538 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 HPS3Q969F9 1004 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 C18orf25Q96B23 403 aaPredicted RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 KIF12Q96FN5 646 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 B3GALT6Q96L58 329 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 NECAB3Q96P71 396 aaPredicted RBP21.1■□□□□ 0.97
LMNA-225ENST00000515824 TTPALQ9BTX7 342 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 FGFBP2Q9BYJ0 223 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 GDPD2Q9HCC8 539 aa21.1■□□□□ 0.97
LMNA-225ENST00000515824 TCF20Q9UGU0 1960 aaKnown RBP21.09■□□□□ 0.97
LMNA-225ENST00000515824 FAM237AA0A1B0GTK4 181 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 PODXLO00592 558 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 ACTN4O43707 911 aaKnown RBP21.09■□□□□ 0.97
LMNA-225ENST00000515824 ADRB2P07550 413 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 CASP1P29466 404 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 ADSSP30520 456 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 ACOT2P49753 483 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 POU5F1Q01860 360 aaKnown RBP21.09■□□□□ 0.97
LMNA-225ENST00000515824 CREMQ03060 361 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 CUL4BQ13620 913 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 SMAD2Q15796 467 aaKnown RBP21.09■□□□□ 0.97
LMNA-225ENST00000515824 FSIP1Q8NA03 581 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 FAM212AQ96EL1 285 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 PAGE5Q96GU1 130 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 IKZF4Q9H2S9 585 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 DZANK1Q9NVP4 752 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 PRKAG3Q9UGI9 489 aa21.09■□□□□ 0.97
LMNA-225ENST00000515824 UBQLN1Q9UMX0 589 aaKnown RBP21.09■□□□□ 0.97
LMNA-225ENST00000515824 TEX28O15482 410 aa21.08■□□□□ 0.97
LMNA-225ENST00000515824 LDHAP00338 332 aaKnown RBP21.08■□□□□ 0.97
LMNA-225ENST00000515824 EPCAMP16422 314 aa21.08■□□□□ 0.97
LMNA-225ENST00000515824 CYP3A5P20815 502 aa21.08■□□□□ 0.97
LMNA-225ENST00000515824 CLCN4P51793 760 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms