RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 KRT5P13647 590 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 TMOD1P28289 359 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 PDE6CP51160 858 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 ITIH3Q06033 890 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 GRIK4Q16099 956 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 MARCH8Q5T0T0 291 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 DDX1Q92499 740 aaKnown RBP16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 USP6NLQ92738 828 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 OSGEPQ9NPF4 335 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 EVPLQ92817 2033 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 A0A087WZ62 844 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 FAM170AA1A519 330 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 PHACTR2O75167 634 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 SLC10A3P09131 477 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 IRF5Q13568 498 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 NCOA4Q13772 614 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 RPS6KA1Q15418 735 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 SYCE1Q8N0S2 351 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 EHD2Q9NZN4 543 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 RNF14Q9UBS8 474 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 KIF4AO95239 1232 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 VTNP04004 478 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 DNA2P51530 1060 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 C2orf54Q08AI8 447 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 CUL2Q13617 745 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 SURF1Q15526 300 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 AMHR2Q16671 573 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 CCDC181Q5TID7 509 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 CDR2LQ86X02 465 aaPredicted RBP16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 PPP1R16BQ96T49 567 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 CDT1Q9H211 546 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 A6NJR5 290 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 DYNC1LI2O43237 492 aaPredicted RBP16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 PAFAH1B1P43034 410 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 INHBEP58166 350 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 BRD3Q15059 726 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 TCEAL1Q15170 157 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 TMCO3Q6UWJ1 677 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 DAAM2Q86T65 1068 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 KRT222Q8N1A0 295 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
THUMPD3-210ENST00000515662 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 CLTAP09496 248 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 ZNF865P0CJ78 1059 aaPredicted RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 NOP14P78316 857 aaKnown RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 GPC5P78333 572 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 SCARA3Q6AZY7 606 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 CC2D1AQ6P1N0 951 aaPredicted RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 PEX26Q7Z412 305 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 MTMR12Q9C0I1 747 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 COG5Q9UP83 839 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 NUB1Q9Y5A7 615 aa16.58■□□□□ 0.25
THUMPD3-210ENST00000515662 CCDC151A5D8V7 595 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 CES2O00748 559 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 ZRANB2O95218 330 aaKnown RBP eCLIP16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 CCL14Q16627 93 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 OLFML2BQ68BL8 750 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 NT5DC3Q86UY8 548 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 KIAA0319LQ8IZA0 1049 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 MMGT1Q8N4V1 131 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 CEP120Q8N960 986 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 TAF4BQ92750 862 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 ABCB6Q9NP58 842 aa16.58■□□□□ 0.24
THUMPD3-210ENST00000515662 ZEB2O60315 1214 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 CST3P01034 146 aaPredicted RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 CALCAP01258 141 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 TUBBP07437 444 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 TBXAS1P24557 533 aaPredicted RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 CYP2C19P33261 490 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 FAM53CQ9NYF3 392 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 UMODL1Q5DID0 1318 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 PASKQ96RG2 1323 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 GPR25O00155 361 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 B4GALT4O60513 344 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 ASS1P00966 412 aaKnown RBP16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 BPIFB4P59827 614 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 OSTNP61366 133 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 PTPROQ16827 1216 aa16.57■□□□□ 0.24
THUMPD3-210ENST00000515662 NLRP7Q8WX94 980 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms