RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	SLC35G2	Q8TBE7	412 aa		11.31	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM174	Q8WUU8	243 aa		11.31	□□□□□ -0.6
CDK18-222	ENST00000515494	TCHP	Q9BT92	498 aa		11.31	□□□□□ -0.6
CDK18-222	ENST00000515494	TNPO2	O14787	897 aa	Known RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	SLC10A3	P09131	477 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CTGF	P29279	349 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	MAPK4	P31152	587 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	NAMPT	P43490	491 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CCT5	P48643	541 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	BIRC3	Q13489	604 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	KIF22	Q14807	665 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	MAMDC4	Q6UXC1	1216 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	HDX	Q7Z353	690 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	LRRC57	Q8N9N7	239 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	RNF149	Q8NC42	400 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	HELQ	Q8TDG4	1101 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	FNBP1	Q96RU3	617 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	PCDHB18P	Q96TA0	734 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	MSTO1	Q9BUK6	570 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	FAM204A	Q9H8W3	233 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	ZBTB42	B2RXF5	422 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	MAPK13	O15264	365 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	P4HA2	O15460	535 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	GART	P22102	1010 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	TNFSF9	P41273	254 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	C10orf76	Q5T2E6	689 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	AP1AR	Q63HQ0	302 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	FMNL3	Q8IVF7	1028 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	PLXNB2	O15031	1838 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	EVPL	Q92817	2033 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	HTT	P42858	3142 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	FAM155A	B1AL88	458 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	EBAG9	O00559	213 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	FTL	P02792	175 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	LGALS2	P05162	132 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	MME	P08473	750 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	KRT5	P13647	590 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	SSTR3	P32745	418 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	PAFAH1B1	P43034	410 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	BRD3	Q15059	726 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	OR6J1	Q8NGC5	347 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	EPS8L1	Q8TE68	723 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	NT5C1B	Q96P26	610 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	TRIM6	Q9C030	488 aa	Predicted RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CPSF2	Q9P2I0	782 aa	Known RBP	11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	CAPN7	Q9Y6W3	813 aa		11.3	□□□□□ -0.6
CDK18-222	ENST00000515494	EXTL3	O43909	919 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	BUB1B	O60566	1050 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	MAF	O75444	373 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	GH1	P01241	217 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	INSRR	P14616	1297 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PRLR	P16471	622 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM62	Q0P6H9	643 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	RPS6KA1	Q15418	735 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PSPC1	Q8WXF1	523 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	RBAK	Q9NYW8	714 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	COG5	Q9UP83	839 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PASK	Q96RG2	1323 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	CHRNB2	P17787	502 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	OSTN	P61366	133 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	BEX3	Q00994	111 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	KCNV1	Q6PIU1	500 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PEX26	Q7Z412	305 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TMC2	Q8TDI7	906 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	DIS3	Q9Y2L1	958 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TLL2	Q9Y6L7	1015 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	ADCY3	O60266	1144 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	ERLIN1	O75477	346 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	KIF4A	O95239	1232 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	GPC3	P51654	580 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	LAMTOR4	Q0VGL1	99 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	MAP2K5	Q13163	448 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM132A	Q24JP5	1023 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	C2CD6	Q53TS8	623 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TDRD10	Q5VZ19	366 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	EFCAB12	Q6NXP0	572 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PHLDB2	Q86SQ0	1253 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	CEP57	Q86XR8	500 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	FAM71A	Q8IYT1	594 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	OR5B17	Q8NGF7	314 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	AFAP1L1	Q8TED9	768 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	ATP8B4	Q8TF62	1192 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	MAF1	Q9H063	256 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	KATNBL1	Q9H079	304 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	SMARCAD1	Q9H4L7	1026 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	ZFYVE28	Q9HCC9	887 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	COQ4	Q9Y3A0	265 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	PLXNA1	Q9UIW2	1896 aa		11.29	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM110-MUSTN1	A8MSY1	372 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CEP104	O60308	925 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	MFAP3	P55082	362 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	TNFAIP2	Q03169	654 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CFAP221	Q4G0U5	840 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	C17orf99	Q6UX52	265 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	TMEM130	Q8N3G9	435 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	SHC3	Q92529	594 aa		11.28	□□□□□ -0.6
CDK18-222	ENST00000515494	CD248	Q9HCU0	757 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms