RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 PSMD6Q15008 389 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 PPP1R7Q15435 360 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 WDR44Q5JSH3 913 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 MIS18BP1Q6P0N0 1132 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 CYFIP1Q7L576 1253 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 CPA5Q8WXQ8 436 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 ART4Q93070 314 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 TRIM7Q9C029 511 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 KIAA1586Q9HCI6 787 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 A1CFQ9NQ94 594 aaKnown RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 FZD1Q9UP38 647 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 MROH7Q68CQ1 1323 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SMIM23A6NLE4 172 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 HLA-DRAP01903 254 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SUPT20HL2P0C7V6 817 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SCP2P22307 547 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 FGFR4P22455 802 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 PIK3CAP42336 1068 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 POLGP54098 1239 aaPredicted RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 STRN3Q13033 797 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 BYSLQ13895 437 aaKnown RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 GNPTABQ3T906 1256 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SUPT20HL1Q3ZLR7 823 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SGO2Q562F6 1265 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 XKR3Q5GH77 459 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 UBAP2Q5T6F2 1119 aaKnown RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 PHLDB2Q86SQ0 1253 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 LRRC19Q9H756 370 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 ACAD9Q9H845 621 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 AVENQ9NQS1 362 aaPredicted RBP18.63■□□□□ 0.57
PRDM5-212ENST00000515109 PCDHB2Q9Y5E7 798 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 MYPNQ86TC9 1320 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 SIP14410 1827 aa18.63■□□□□ 0.57
PRDM5-212ENST00000515109 NFKBIEO00221 500 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 FSCN2O14926 492 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 RRM1P23921 792 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ABCD1P33897 745 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 NLRP11P59045 1033 aaKnown RBP18.62■□□□□ 0.57
PRDM5-212ENST00000515109 SLMAPQ14BN4 828 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ZACNQ401N2 412 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ZNF677Q86XU0 584 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 C3orf20Q8ND61 904 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 UHMK1Q8TAS1 419 aaKnown RBP18.62■□□□□ 0.57
PRDM5-212ENST00000515109 C1orf54Q8WWF1 131 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 PGM2Q96G03 612 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 AZI2Q9H6S1 392 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 CNOT7Q9UIV1 285 aaKnown RBP18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ADAMTS5Q9UNA0 930 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 GJA3Q9Y6H8 435 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ACOT2P49753 483 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 WNT7BP56706 349 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 CALCOCO2Q13137 446 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 PRAMEF18Q5VWM3 479 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 TDRD10Q5VZ19 366 aaKnown RBP18.62■□□□□ 0.57
PRDM5-212ENST00000515109 MDM1Q8TC05 714 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 C12orf42Q96LP6 360 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 TEX13BQ9BXU2 312 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 ZNF112Q9UJU3 913 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 GGA2Q9UJY4 613 aa18.62■□□□□ 0.57
PRDM5-212ENST00000515109 AGO2Q9UKV8 859 aaKnown RBP18.62■□□□□ 0.57
PRDM5-212ENST00000515109 RGS16O15492 202 aaPredicted RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 STAM2O75886 525 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 MYBL1P10243 752 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 NSFP46459 744 aaKnown RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 BPIFB4P59827 614 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 CLDN10P78369 228 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 KRT17Q04695 432 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 SNX1Q13596 522 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 SPOPLQ6IQ16 392 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 CCDC25Q86WR0 208 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 RIPK2O43353 540 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 C4BPAP04003 597 aaKnown RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 RARGP13631 454 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 ADCY2Q08462 1091 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 IFT88Q13099 833 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 QPCTQ16769 361 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 C2CD6Q53TS8 623 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 RNF187Q5TA31 235 aaPredicted RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 LLGL2Q6P1M3 1020 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 YTHDF3Q7Z739 585 aaKnown RBP18.61■□□□□ 0.57
PRDM5-212ENST00000515109 SELENOSQ9BQE4 189 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 FAM129AQ9BZQ8 928 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
PRDM5-212ENST00000515109 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
PRDM5-212ENST00000515109 TGFB2P61812 414 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 ASAP3Q8TDY4 903 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 SLCO2A1Q92959 643 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 CEP89Q96ST8 783 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 DDX20Q9UHI6 824 aaKnown RBP18.6■□□□□ 0.57
PRDM5-212ENST00000515109 KCNG1Q9UIX4 513 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 LRRIQ4A6NIV6 560 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 VNN1O95497 513 aa18.6■□□□□ 0.57
PRDM5-212ENST00000515109 SLC1A1P43005 524 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms