RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
AP3S1-208ENST00000515066 EPHB6O15197 1021 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 STX10O60499 249 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 N4BP1O75113 896 aaKnown RBP18.18■□□□□ 0.5
AP3S1-208ENST00000515066 RAG1P15918 1043 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 SLC9A1P19634 815 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 PON1P27169 355 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
AP3S1-208ENST00000515066 FAM189BP81408 668 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 APBA1Q02410 837 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 CD302Q8IX05 232 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 GSTCDQ8NEC7 633 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 TAS1R2Q8TE23 839 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 SEMA4DQ92854 862 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 ZFP42Q96MM3 310 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 PPP1R9BQ96SB3 815 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 TTYH3Q9C0H2 523 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 PARP2Q9UGN5 583 aa18.18■□□□□ 0.5
AP3S1-208ENST00000515066 VNN1O95497 513 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 CSF2RAP15509 400 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 RFC2P35250 354 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 AFF1P51825 1210 aaKnown RBP18.17■□□□□ 0.5
AP3S1-208ENST00000515066 TBX2Q13207 712 aaPredicted RBP18.17■□□□□ 0.5
AP3S1-208ENST00000515066 ZBTB6Q15916 424 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 GLRA4Q5JXX5 417 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 MFSD5Q6N075 450 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 TRIM65Q6PJ69 517 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 CXorf38Q8TB03 319 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 SIX2Q9NPC8 291 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 RNF19AQ9NV58 838 aa18.17■□□□□ 0.5
AP3S1-208ENST00000515066 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
AP3S1-208ENST00000515066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.16■□□□□ 0.5
AP3S1-208ENST00000515066 ENPP3O14638 875 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 PTGESO14684 152 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 NOL4O94818 638 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 GYPCP04921 128 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 ITGA4P13612 1032 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 MLH1P40692 756 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 AP3M2P53677 418 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 TFAMQ00059 246 aaKnown RBP18.16■□□□□ 0.5
AP3S1-208ENST00000515066 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 DUOXA2Q1HG44 320 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 FAM43BQ6ZT52 329 aaPredicted RBP18.16■□□□□ 0.5
AP3S1-208ENST00000515066 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 FBXL13Q8NEE6 735 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 C1orf112Q9NSG2 853 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 FAM207AQ9NSI2 230 aaPredicted RBP18.16■□□□□ 0.5
AP3S1-208ENST00000515066 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
AP3S1-208ENST00000515066 SMIM28A0A1B0GU29 152 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 SKIP12755 728 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 ACTN1P12814 892 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 KCNE1P15382 129 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 NT5DC4Q86YG4 428 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 C1orf127Q8N9H9 656 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 KIF12Q96FN5 646 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 GAD1Q99259 594 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 INTS2Q9H0H0 1204 aaKnown RBP18.15■□□□□ 0.5
AP3S1-208ENST00000515066 SIX4Q9UIU6 781 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 GIT1Q9Y2X7 761 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 DERAQ9Y315 318 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 ARL5CA6NH57 179 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 RNF225M0QZC1 329 aaPredicted RBP18.15■□□□□ 0.5
AP3S1-208ENST00000515066 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 TMEM191BP0C7N4 346 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 GUCY2FP51841 1108 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 BIRC3Q13489 604 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 CNKSR3Q6P9H4 555 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 DRC7Q8IY82 874 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 C7orf61Q8IZ16 206 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 LSM14BQ9BX40 385 aaKnown RBP18.15■□□□□ 0.5
AP3S1-208ENST00000515066 GANQ9H2C0 597 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 RSAD1Q9HA92 442 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 PLCB1Q9NQ66 1216 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 RAB20Q9NX57 234 aa18.15■□□□□ 0.5
AP3S1-208ENST00000515066 COL4A6Q14031 1691 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 EOMESO95936 686 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 CST3P01034 146 aaPredicted RBP18.14■□□□□ 0.49
AP3S1-208ENST00000515066 NAB2Q15742 525 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 FIGNQ5HY92 759 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 RNF169Q8NCN4 708 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 EHBP1Q8NDI1 1231 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 C18orf25Q96B23 403 aaPredicted RBP18.14■□□□□ 0.49
AP3S1-208ENST00000515066 ELMO3Q96BJ8 720 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 PPP1R10Q96QC0 940 aaKnown RBP18.14■□□□□ 0.49
AP3S1-208ENST00000515066 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
AP3S1-208ENST00000515066 INPPL1O15357 1258 aa18.13■□□□□ 0.49
AP3S1-208ENST00000515066 TRIM21P19474 475 aaKnown RBP18.13■□□□□ 0.49
AP3S1-208ENST00000515066 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
AP3S1-208ENST00000515066 FXR1P51114 621 aaKnown RBP eCLIP18.13■□□□□ 0.49
AP3S1-208ENST00000515066 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
AP3S1-208ENST00000515066 CETN1Q12798 172 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms