RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, human

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB3-205	ENST00000514469	CLSTN3	Q9BQT9	956 aa		11.45	□□□□□ -0.58
HMGXB3-205	ENST00000514469	WDR6	Q9NNW5	1121 aa	Known RBP	11.45	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SLC38A7	Q9NVC3	462 aa		11.45	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ANKFY1	Q9P2R3	1169 aa		11.45	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CLIC4	Q9Y696	253 aa		11.45	□□□□□ -0.58
HMGXB3-205	ENST00000514469	KMT2E	Q8IZD2	1858 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TECTA	O75443	2155 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469		K7ELQ4	463 aa	Predicted RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PODXL	O00592	558 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	N4BP1	O75113	896 aa	Known RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	B3GAT3	O94766	335 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ASGR2	P07307	311 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MYB	P10242	640 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HARS	P12081	509 aa	Known RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SCP2	P22307	547 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MCM6	Q14566	821 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HAUS6	Q7Z4H7	955 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CEP57	Q86XR8	500 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FBXL6	Q8N531	539 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SMG7	Q92540	1137 aa	Known RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	LARP4B	Q92615	738 aa	Known RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PBXIP1	Q96AQ6	731 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TCHP	Q9BT92	498 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CCSER1	Q9C0I3	900 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HAPLN2	Q9GZV7	340 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MTRR	Q9UBK8	725 aa		11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FBXO2	Q9UK22	296 aa	Predicted RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.44	□□□□□ -0.58
HMGXB3-205	ENST00000514469	VWA8	A3KMH1	1905 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469		K7ENM7	598 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CLDN3	O15551	220 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ADAM12	O43184	909 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TRAPPC3	O43617	180 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ZMYND10	O75800	440 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FAM13A	O94988	1023 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PIGR	P01833	764 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TKT	P29401	623 aa	Known RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HOXA9	P31269	272 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	DHX8	Q14562	1220 aa	Known RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SLC10A6	Q3KNW5	377 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SUGP1	Q8IWZ8	645 aa	Known RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	RASSF8	Q8NHQ8	419 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	STAM	Q92783	540 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	C18orf25	Q96B23	403 aa	Predicted RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	DDX27	Q96GQ7	796 aa	Known RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FIZ1	Q96SL8	496 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PRKD2	Q9BZL6	878 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SMOC2	Q9H3U7	446 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PARVG	Q9HBI0	331 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	EPS15L1	Q9UBC2	864 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	LIMD1	Q9UGP4	676 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TBX20	Q9UMR3	447 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MTMR6	Q9Y217	621 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SRPRB	Q9Y5M8	271 aa	Known RBP	11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469	BACE2	Q9Y5Z0	518 aa		11.43	□□□□□ -0.58
HMGXB3-205	ENST00000514469		I3L4J1	428 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HNRNPDL	O14979	420 aa	Known RBP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FAM189A1	O60320	539 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TBCA	O75347	108 aa	Known RBP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	C8A	P07357	584 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	POU2F2	P09086	479 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CXCL8	P10145	99 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MARCKS	P29966	332 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	RPL9	P32969	192 aa	Known RBP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	BRCC3	P46736	316 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	RAB33A	Q14088	237 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SEZ6	Q53EL9	994 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	LIN9	Q5TKA1	542 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	FAM173B	Q6P4H8	233 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ANKS3	Q6ZW76	656 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	USP49	Q70CQ1	688 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MAP4K3	Q8IVH8	894 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MYCT1	Q8N699	235 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	BICD1	Q96G01	975 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	EPSTI1	Q96J88	318 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	STK17A	Q9UEE5	414 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TUBGCP4	Q9UGJ1	667 aa		11.42	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PDCD11	Q14690	1871 aa	Known RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TTC26	A0AVF1	554 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SYN3	O14994	580 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TRAK2	O60296	914 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	PDGFB	P01127	241 aa	Predicted RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	KRT18	P05783	430 aa	Known RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	CLTA	P09496	248 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	HOXD11	P31277	338 aa	Predicted RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	GBP2	P32456	591 aa	Predicted RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	ABCD1	P33897	745 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	OR1D2	P34982	312 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	DDIT3	P35638	169 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	TNFSF9	P41273	254 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	MATR3	P43243	847 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	LIG4	P49917	911 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	VCP	P55072	806 aa	Known RBP	11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	GTF2B	Q00403	316 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	NHLH1	Q02575	133 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	KYAT1	Q16773	422 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SPECC1	Q5M775	1068 aa		11.41	□□□□□ -0.58
HMGXB3-205	ENST00000514469	SLC8B1	Q6J4K2	584 aa		11.41	□□□□□ -0.58

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