RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 IGSF21Q96ID5 467 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 MSTO1Q9BUK6 570 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 COLEC11Q9BWP8 271 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 PLEKHA5Q9HAU0 1116 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 SPTLC3Q9NUV7 552 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 RMND1Q9NWS8 449 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 ANKFY1Q9P2R3 1169 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 DNAJB4Q9UDY4 337 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 STK39Q9UEW8 545 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 COL4A6Q14031 1691 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 OGTO15294 1046 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 NCK2O43639 380 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 KLRC4O43908 158 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 RHOBTB3O94955 611 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 KCNE1P15382 129 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 DNAJB1P25685 340 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 MSNP26038 577 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 PBX3P40426 434 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 OR1G1P47890 313 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 CASP5P51878 434 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 ERVFC1P60507 584 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 POU5F1Q01860 360 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 EHHADHQ08426 723 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 KCNA1Q09470 495 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 TUSC3Q13454 348 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 SEZ6Q53EL9 994 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 TIGD5Q53EQ6 642 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 ZNF658Q5TYW1 1059 aaPredicted RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 SLC39A4Q6P5W5 647 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 EPM2AIP1Q7L775 607 aaPredicted RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 DDX53Q86TM3 631 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 MICALL1Q8N3F8 863 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 HPS3Q969F9 1004 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 CCDC47Q96A33 483 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 HAPLN2Q9GZV7 340 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 KCNF1Q9H3M0 494 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 NSUN3Q9H649 340 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 NGRNQ9NPE2 291 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 AGO2Q9UKV8 859 aaKnown RBP9.05□□□□□ -0.96
CCL28-204ENST00000514421 ARID2Q68CP9 1835 aa9.05□□□□□ -0.96
CCL28-204ENST00000514421 PTPRSQ13332 1948 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 LRRC10BA6NIK2 292 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 PTGESO14684 152 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCL28-204ENST00000514421 B4GALT3O60512 393 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 TADA2AO75478 443 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 CXCL14O95715 111 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 LDHAP00338 332 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 RPN1P04843 607 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 ADRB2P07550 413 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 GARTP22102 1010 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 ADSSP30520 456 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 GSDMDP57764 484 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 SNRPFP62306 86 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 FANCCQ00597 558 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 STK4Q13043 487 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 SPATA1Q5VX52 437 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 DCLRE1AQ6PJP8 1040 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 FOXR2Q6PJQ5 311 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 CD302Q8IX05 232 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 VPS52Q8N1B4 723 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 KIAA1524Q8TCG1 905 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 POMGNT1Q8WZA1 660 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 PPP1R10Q96QC0 940 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 TSPAN18Q96SJ8 248 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 FGFBP2Q9BYJ0 223 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 CXCL16Q9H2A7 254 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 SLC39A2Q9NP94 309 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 SLC38A7Q9NVC3 462 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 CNTN3Q9P232 1028 aa9.04□□□□□ -0.96
CCL28-204ENST00000514421 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 PRG3Q9Y2Y8 225 aaPredicted RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
CCL28-204ENST00000514421 TTC26A0AVF1 554 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 LACTBL1A8MY62 500 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 TISP43B9A030 160 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 FSCN2O14926 492 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 CBFA2T2O43439 604 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 FAM189A1O60320 539 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 RPL9P32969 192 aaKnown RBP9.03□□□□□ -0.96
CCL28-204ENST00000514421 HOXD13P35453 343 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 IRS1P35568 1242 aa9.03□□□□□ -0.96
CCL28-204ENST00000514421 PPP1R2P41236 205 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms