RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 TLR3O15455 904 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 RRP8O43159 456 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TREHO43280 583 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 BRINP1O60477 761 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GUCY1B2O75343 617 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 DNAJC8O75937 253 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FLOT1O75955 427 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 KRT1P04264 644 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ABCB1P08183 1280 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 EPB41P11171 864 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GDI1P31150 447 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 VBP1P61758 197 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 SERINC3Q13530 473 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 KLHL38Q2WGJ6 581 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 HECTD3Q5T447 861 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 DCAF8Q5TAQ9 597 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GRTP1Q5TC63 336 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CYP4A22Q5TCH4 519 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 PRPF40BQ6NWY9 871 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 BORAQ6PGQ7 559 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 USP37Q86T82 979 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TSPYL5Q86VY4 417 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CCDC13Q8IYE1 715 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 EHBP1Q8NDI1 1231 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CNNM3Q8NE01 707 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 NEDD1Q8NHV4 660 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 COL26A1Q96A83 441 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ANKRD27Q96NW4 1050 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 BTBD2Q9BX70 525 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 OSBPL1AQ9BXW6 950 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 NUF2Q9BZD4 464 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 PCDHGA3Q9Y5H0 932 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 DLEC1Q9Y238 1755 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 WDR90Q96KV7 1748 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 C15orf38-AP3S2A0A0A6YYH1 394 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 A0A0J9YVX5 310 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CCDC162PA2VCL2 907 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 C16orf96A6NNT2 1141 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 E9PMD0 336 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ICMTO60725 284 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 EPHB1P54762 984 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ARID5AQ03989 594 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 PTK2Q05397 1052 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ENPEPQ07075 957 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TRIM32Q13049 653 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 MAPRE2Q15555 327 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 NDUFA5Q16718 116 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CFAP100Q494V2 611 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FAM209BQ5JX69 171 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ISLR2Q6UXK2 745 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 LRRC71Q8N4P6 559 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 DIS3LQ8TF46 1054 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 IFT81Q8WYA0 676 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 NTMT1Q9BV86 223 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 MOV10L1Q9BXT6 1211 aaKnown RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 IFT22Q9H7X7 185 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GPHNQ9NQX3 736 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 HSPBP1Q9NZL4 362 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FAM153AQ9UHL3 310 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 SGK1O00141 431 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TP73O15350 636 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 MEFVO15553 781 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 KCNQ2O43526 872 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ATP5HO75947 161 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CRYZL1O95825 349 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 ENO2P09104 434 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 VAV1P15498 845 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FECHP22830 423 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TBXAS1P24557 533 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 IFNA8P32881 189 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CSTF2P33240 577 aaKnown RBP eCLIP7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 SYDE2Q5VT97 1194 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 C3orf62Q6ZUJ4 267 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 STAMBPL1Q96FJ0 436 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 GAL3ST1Q99999 423 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 C9orf16Q9BUW7 83 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 TRIM10Q9UDY6 481 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 JAG2Q9Y219 1238 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 KIF7Q2M1P5 1343 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 NCAPD2Q15021 1401 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 PNMA6FA0A0J9YX94 578 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 CLRN2A0PK11 232 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 ZSCAN5BA6NJL1 495 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 FOXO6A8MYZ6 492 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 NIPSNAP2O75323 286 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 SERPINB7O75635 380 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
NIPBL-208ENST00000514335 HSPA4LO95757 839 aa7.67□□□□□ -1.18
NIPBL-208ENST00000514335 SSBP05455 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms