RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 APOBEC3HQ6NTF7 200 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 MIGA2Q7L4E1 593 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 GPR155Q7Z3F1 870 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 FAM84BQ96KN1 310 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 MRGPRX3Q96LB0 322 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 CRBNQ96SW2 442 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 LRFN3Q9BTN0 628 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 THEGQ9P2T0 379 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 APEX2Q9UBZ4 518 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 PCDHB10Q9UN67 800 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 ZHX2Q9Y6X8 837 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 PRUNE2Q8WUY3 3088 aa4.59□□□□□ -1.68
PDLIM5-218ENST00000513341 H0Y858 1186 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 NOP56O00567 594 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 CTNND1O60716 968 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 FBXO21O94952 628 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 CKMP06732 381 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 GIPRP48546 466 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 LSAMPQ13449 338 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 NFYCQ13952 458 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 CCDC30Q5VVM6 783 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 SCYL3Q8IZE3 742 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 ANKRD13CQ8N6S4 541 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 APBA2Q99767 749 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 SENP6Q9GZR1 1112 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 CEP72Q9P209 647 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 MORF4L1Q9UBU8 362 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 AGTPBP1Q9UPW5 1226 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 MAP3K2Q9Y2U5 619 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 LAMA2P24043 3122 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 AK9Q5TCS8 1911 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 SPEF2Q9C093 1822 aa4.58□□□□□ -1.68
PDLIM5-218ENST00000513341 EYSQ5T1H1 3165 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 PI4KAP2A4QPH2 592 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 TMEM191CA6NGB0 347 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 SNAP23O00161 211 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 DNM1LO00429 736 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 MEFVO15553 781 aaPredicted RBP4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 ZNF853P0CG23 659 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 CYP2B6P20813 491 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 HOXC12P31275 282 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 CACNB3P54284 484 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 GCKRQ14397 625 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 ZMAT1Q5H9K5 638 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 TMEM31Q5JXX7 168 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 C9orf50Q5SZB4 431 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 SLC39A5Q6ZMH5 540 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 LDHAL6AQ6ZMR3 332 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 GADL1Q6ZQY3 521 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 PI4KAP1Q8N8J0 262 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 RCBTB1Q8NDN9 531 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 SOCS4Q8WXH5 440 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 TRIB2Q92519 343 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 LPAR1Q92633 364 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 USP6NLQ92738 828 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 KCNH6Q9H252 994 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 MYH16Q9H6N6 1097 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 RBPJLQ9UBG7 517 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 ZFP69BQ9UJL9 534 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 FBXL7Q9UJT9 491 aa4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 LAS1LQ9Y4W2 734 aaKnown RBP4.57□□□□□ -1.68
PDLIM5-218ENST00000513341 MUC6Q6W4X9 2439 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 MYBBP1AQ9BQG0 1328 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 ENTPD3O75355 529 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 FRAT2O75474 233 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 GLRX3O76003 335 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 ZNF888P0CJ79 500 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 MAPK4P31152 587 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 HOXA7P31268 230 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 RGS2P41220 211 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 GYG1P46976 350 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CASP7P55210 303 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 GNAI1P63096 354 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CALD1Q05682 793 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 SKIDA1Q1XH10 827 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 RNF151Q2KHN1 245 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CCDC57Q2TAC2 916 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CAVIN4Q5BKX8 364 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 VPS37DQ86XT2 251 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 TMPRSS6Q8IU80 811 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 ZNF654Q8IZM8 581 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 ZNF808Q8N4W9 903 aaPredicted RBP4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 USP38Q8NB14 1042 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 KREMEN2Q8NCW0 462 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 BADQ92934 168 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CLIP3Q96DZ5 547 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 SCYL1Q96KG9 808 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 SPATA32Q96LK8 384 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CCDC140Q96MF4 163 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 TGIF2Q9GZN2 237 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 SLC6A20Q9NP91 592 aa4.56□□□□□ -1.68
PDLIM5-218ENST00000513341 CNNM1Q9NRU3 951 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms