RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 TSPAN18Q96SJ8 248 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 TMEM175Q9BSA9 504 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 PLVAPQ9BX97 442 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 FAN1Q9Y2M0 1017 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CHD9Q3L8U1 2897 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 TRIM49BA6NDI0 452 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 C5orf67F2Z3F1 127 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 NRP1O14786 923 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CASP4P49662 377 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 LRRC63Q05C16 580 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CEP135Q66GS9 1140 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 KLHL23Q8NBE8 558 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 FAM161BQ96MY7 647 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 PDE11AQ9HCR9 933 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CACNG4Q9UBN1 327 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CTNND2Q9UQB3 1225 aa22.82■■□□□ 1.24
NEIL3-202ENST00000513321 CASTOR2A6NHX0 329 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 SOX4Q06945 474 aaPredicted RBP22.81■■□□□ 1.24
NEIL3-202ENST00000513321 GRIN2CQ14957 1233 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 DPCR1Q3MIW9 517 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 SASS6Q6UVJ0 657 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 RABGGTAQ92696 567 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 EEF2KMTQ96G04 330 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 GOLGA2P5Q9HBQ8 144 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 SPG21Q9NZD8 308 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 FRMD4BQ9Y2L6 1034 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 DERAQ9Y315 318 aa22.81■■□□□ 1.24
NEIL3-202ENST00000513321 EPOPA6NHQ4 379 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 RFXAPO00287 272 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 NFICP08651 508 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 STX17P56962 302 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 CYP24A1Q07973 514 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 PAK1Q13153 545 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 TMEM132DQ14C87 1099 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 Q7L0L9 218 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 SLC39A11Q8N1S5 342 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 MFSD14AQ96MC6 490 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 PAAF1Q9BRP4 392 aa22.8■■□□□ 1.24
NEIL3-202ENST00000513321 C11orf84Q9BUA3 381 aaPredicted RBP22.8■■□□□ 1.24
NEIL3-202ENST00000513321 UBQLN1Q9UMX0 589 aaKnown RBP22.8■■□□□ 1.24
NEIL3-202ENST00000513321 PRG3Q9Y2Y8 225 aaPredicted RBP22.8■■□□□ 1.24
NEIL3-202ENST00000513321 CITO14578 2027 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 BICDL2A1A5D9 508 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 CARNS1A5YM72 827 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 H3BNC9 293 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 CETN3O15182 167 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 FGF18O76093 207 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 FKBP3Q00688 224 aaKnown RBP22.79■■□□□ 1.24
NEIL3-202ENST00000513321 GPM6BQ13491 265 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 SURF1Q15526 300 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 TTI2Q6NXR4 508 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 DUSP9Q99956 384 aaKnown RBP22.79■■□□□ 1.24
NEIL3-202ENST00000513321 COLEC11Q9BWP8 271 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 PRDM12Q9H4Q4 367 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 TUBGCP4Q9UGJ1 667 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 C2CD2Q9Y426 696 aa22.79■■□□□ 1.24
NEIL3-202ENST00000513321 XPOTO43592 962 aaKnown RBP22.78■■□□□ 1.24
NEIL3-202ENST00000513321 AKAP3O75969 853 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 ITGB1P05556 798 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 CYP3A5P20815 502 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 PPM1AP35813 382 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 PSMD6Q15008 389 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 SPATA1Q5VX52 437 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 TMEM173Q86WV6 379 aaPredicted RBP22.78■■□□□ 1.24
NEIL3-202ENST00000513321 EFCAB13Q8IY85 973 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 TMEM130Q8N3G9 435 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 CCDC127Q96BQ5 260 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 IGSF21Q96ID5 467 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 UROC1Q96N76 676 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 ALG13Q9NP73 1137 aaKnown RBP22.78■■□□□ 1.24
NEIL3-202ENST00000513321 RWDD2AQ9UIY3 292 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 TRIP11Q15643 1979 aa22.78■■□□□ 1.24
NEIL3-202ENST00000513321 TDRD15B5MCY1 1934 aaKnown RBP22.78■■□□□ 1.24
NEIL3-202ENST00000513321 F8W810 466 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 PSMC2P35998 433 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 CLCNKBP51801 687 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 GUCY2FP51841 1108 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 TFAMQ00059 246 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 FOXR2Q6PJQ5 311 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 NT5DC4Q86YG4 428 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 ZC3H3Q8IXZ2 948 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 DEFB123Q8N688 67 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 BEST2Q8NFU1 509 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 BCL7CQ8WUZ0 217 aaPredicted RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 DDX27Q96GQ7 796 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 DACH1Q9UI36 760 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 MAPK13O15264 365 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 DLATP10515 647 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 RPL9P32969 192 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 PLCB3Q01970 1234 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 KRT17Q04695 432 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 UPP1Q16831 310 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 DCLRE1AQ6PJP8 1040 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 FAM186BQ8IYM0 893 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 SPPL3Q8TCT6 385 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 GDPD5Q8WTR4 605 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 CACTINQ8WUQ7 758 aaKnown RBP22.77■■□□□ 1.24
NEIL3-202ENST00000513321 TMEM169Q96HH4 297 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 MED15Q96RN5 788 aa22.77■■□□□ 1.24
NEIL3-202ENST00000513321 FNBP1Q96RU3 617 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms