RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CD302Q8IX05 232 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 ZC3H3Q8IXZ2 948 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 TMEM192Q8IY95 271 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 CMTR2Q8IYT2 770 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 LRRC43Q8N309 656 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 URGCPQ8TCY9 931 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 HELQQ8TDG4 1101 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 SAAL1Q96ER3 474 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 SNX27Q96L92 541 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 YME1L1Q96TA2 773 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 MKNK1Q9BUB5 465 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 MRPL9Q9BYD2 267 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 TMEM117Q9H0C3 514 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 PCIF1Q9H4Z3 704 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 RPF1Q9H9Y2 349 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 RNF19AQ9NV58 838 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 DMAC2Q9NW81 257 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 RWDD2AQ9UIY3 292 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 CPSF3Q9UKF6 684 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 INSL6Q9Y581 213 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 TTC26A0AVF1 554 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 GOLGA8IPA6NC78 632 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ARL5CA6NH57 179 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 GOLGA8JA6NMD2 632 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 TBKBP1A7MCY6 615 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CETN3O15182 167 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 TLL1O43897 1013 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 OFD1O75665 1012 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 IL18RAPO95256 599 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ADRB2P07550 413 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 EPB41P11171 864 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 STX17P56962 302 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 GRIK3Q13003 919 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ADAM9Q13443 819 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 SNRNP35Q16560 246 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 SEZ6Q53EL9 994 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 XKR4Q5GH76 650 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ZBTB41Q5SVQ8 909 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ANKRD40Q6AI12 368 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 FAM117BQ6P1L5 589 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CRELD2Q6UXH1 353 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 LRRC55Q6ZSA7 311 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 C11orf57Q6ZUT1 292 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 TMCO2Q7Z6W1 182 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 METTL3Q86U44 580 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 NT5DC4Q86YG4 428 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CBWD2Q8IUF1 395 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CSGALNACT2Q8N6G5 542 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 NOC3LQ8WTT2 800 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ZFP42Q96MM3 310 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 TSPAN18Q96SJ8 248 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 GAD1Q99259 594 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 RAD9AQ99638 391 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 FAM213AQ9BRX8 229 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 FUCA2Q9BTY2 467 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 NAT10Q9H0A0 1025 aaKnown RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 ASB7Q9H672 318 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 PLEKHA5Q9HAU0 1116 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 RBAKQ9NYW8 714 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 CNTN3Q9P232 1028 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 KANSL3Q9P2N6 904 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 FRMD4BQ9Y2L6 1034 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
HMGXB3-204ENST00000513318 MYO7AQ13402 2215 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 PTPRDP23468 1912 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 PTGESO14684 152 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 SLC16A3O15427 465 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 XPOTO43592 962 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 FGFR1OPO95684 399 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 CAVIN2O95810 425 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 THP07101 528 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 PSMC2P35998 433 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 CASP4P49662 377 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 GATMP50440 423 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 SCNN1GP51170 649 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 ENPEPQ07075 957 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 CYP24A1Q07973 514 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 RAB30Q15771 203 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 TPD52L1Q16890 204 aaPredicted RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 LRIT3Q3SXY7 679 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 PAN2Q504Q3 1202 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 NOMO2Q5JPE7 1267 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 GLRA4Q5JXX5 417 aa8.23□□□□□ -1.09
HMGXB3-204ENST00000513318 ALKAL1Q6UXT8 129 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms