RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
TRIO-220ENST00000512979 PCDHGC4Q9Y5F7 938 aa10.56□□□□□ -0.72
TRIO-220ENST00000512979 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
TRIO-220ENST00000512979 STK36Q9NRP7 1315 aa10.56□□□□□ -0.72
TRIO-220ENST00000512979 PER2O15055 1255 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 DCXO43602 365 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 CSDE1O75534 798 aaKnown RBP10.55□□□□□ -0.72
TRIO-220ENST00000512979 ALADP13716 330 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 ACPPP15309 386 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 NFKB1P19838 968 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 DNM2P50570 870 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 ERVFC1P60507 584 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 PSMC5P62195 406 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 PPP2R5CQ13362 524 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 ERICH6BQ5W0A0 696 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 PLA2G4FQ68DD2 849 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 PIK3AP1Q6ZUJ8 805 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 NEK8Q86SG6 692 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 LRRC43Q8N309 656 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 MSLNLQ96KJ4 702 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 CEP89Q96ST8 783 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
TRIO-220ENST00000512979 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 TLE6Q9H808 572 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 GJB4Q9NTQ9 266 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 DACT1Q9NYF0 836 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 CLEC1BQ9P126 229 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
TRIO-220ENST00000512979 VAV3Q9UKW4 847 aa10.55□□□□□ -0.72
TRIO-220ENST00000512979 BARX2Q9UMQ3 279 aaPredicted RBP10.55□□□□□ -0.72
TRIO-220ENST00000512979 A0A087WZ62 844 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 IGKV6-21A0A0C4DH24 114 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 A0A0U1RQF3 1178 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 FSCN2O14926 492 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 MARCH6O60337 910 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 CCNT1O60563 726 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 CTDNEP1O95476 244 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 EYA4O95677 639 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 GLP2RO95838 553 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 GCFC2P16383 781 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRIO-220ENST00000512979 EIF4A3P38919 411 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 PBX3P40426 434 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 AK2P54819 239 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ANAPC15P60006 121 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 TNP2Q05952 138 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 FNDC1Q4ZHG4 1894 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 CLLU1OSQ5K130 101 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 PLPP4Q5VZY2 271 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 PPP4R3AQ6IN85 833 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ANO5Q75V66 913 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 MRPS27Q92552 414 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 FAM122AQ96E09 287 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ZNF558Q96NG5 402 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 CDCA3Q99618 268 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 JPH2Q9BR39 696 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ENTPD7Q9NQZ7 604 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 PUF60Q9UHX1 559 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
TRIO-220ENST00000512979 TMA7Q9Y2S6 64 aaKnown RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
TRIO-220ENST00000512979 WDR81Q562E7 1941 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRIO-220ENST00000512979 MAFO75444 373 aaPredicted RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 KIF4AO95239 1232 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 EOMESO95936 686 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 MAPTP10636 758 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 ATF7P17544 494 aaPredicted RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 PPM1AP35813 382 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 PLA2G5P39877 138 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 QARSP47897 775 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 NPEPPSP55786 919 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 COASYQ13057 564 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 UBAP2LQ14157 1087 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 DUSP6Q16828 381 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 KSR1Q8IVT5 923 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 NECAB1Q8N987 351 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 SMRP1Q8NCR6 262 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 WASF1Q92558 559 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 HAS1Q92839 578 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
TRIO-220ENST00000512979 SEC16BQ96JE7 1060 aa10.53□□□□□ -0.72
TRIO-220ENST00000512979 CEP170P1Q96L14 293 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms