RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
SDHA-215ENST00000512962 USP18Q9UMW8 372 aa13.79□□□□□ -0.2
SDHA-215ENST00000512962 PIN4Q9Y237 131 aaKnown RBP13.79□□□□□ -0.2
SDHA-215ENST00000512962 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
SDHA-215ENST00000512962 STBD1O95210 358 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 GLUD1P00367 558 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 POMCP01189 267 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 ZNF76P36508 570 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 LMNB2Q03252 620 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 COL9A2Q14055 689 aaPredicted RBP13.78□□□□□ -0.2
SDHA-215ENST00000512962 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
SDHA-215ENST00000512962 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
SDHA-215ENST00000512962 LPAL2Q16609 132 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 PPM1JQ5JR12 505 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 UBXN11Q5T124 520 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 RTKNQ9BST9 563 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 CEP131Q9UPN4 1083 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
SDHA-215ENST00000512962 SPEGQ15772 3267 aa13.77□□□□□ -0.2
SDHA-215ENST00000512962 SMCO2A6NFE2 343 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 LAMTOR5O43504 91 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 TGM5O43548 720 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 URODP06132 367 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 PSAPP07602 524 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 TDGF1P13385 188 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.21
SDHA-215ENST00000512962 CHMLP26374 656 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 TARSP26639 723 aaKnown RBP13.77□□□□□ -0.21
SDHA-215ENST00000512962 TAGLNQ01995 201 aaKnown RBP13.77□□□□□ -0.21
SDHA-215ENST00000512962 SPEM2Q0P670 501 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 FZD5Q13467 585 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
SDHA-215ENST00000512962 ARID2Q68CP9 1835 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 STAMQ92783 540 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 IFT43Q96FT9 208 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 RXFP1Q9HBX9 757 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 LTB4R2Q9NPC1 389 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 PCDHB2Q9Y5E7 798 aa13.77□□□□□ -0.21
SDHA-215ENST00000512962 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
SDHA-215ENST00000512962 VWA8A3KMH1 1905 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 PRR5-ARHGAP8B1AHC4 643 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 ZNF623O75123 536 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 FOSP01100 380 aaPredicted RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 CYP3A4P08684 503 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 TMOD1P28289 359 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 GLUD2P49448 558 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 ARHGAP8P85298 464 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 SMAP1Q8IYB5 467 aaPredicted RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 MRRFQ96E11 262 aaKnown RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 CITED4Q96RK1 184 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 BCO2Q9BYV7 579 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 MINDY3Q9H8M7 445 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 PRMT8Q9NR22 394 aaPredicted RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 MIOSQ9NXC5 875 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
SDHA-215ENST00000512962 CACNG4Q9UBN1 327 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 RALGAPA1Q6GYQ0 2036 aa13.76□□□□□ -0.21
SDHA-215ENST00000512962 SGSM2O43147 1006 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 CHMP2AO43633 222 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 BMP2P12643 396 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 MTERF2Q49AM1 385 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 C6orf118Q5T5N4 469 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 GRASPQ7Z6J2 395 aaPredicted RBP13.75□□□□□ -0.21
SDHA-215ENST00000512962 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 RABGGTAQ92696 567 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 RSAD1Q9HA92 442 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 TBC1D22BQ9NU19 505 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
SDHA-215ENST00000512962 TICRRQ7Z2Z1 1910 aa13.74□□□□□ -0.21
SDHA-215ENST00000512962 SLC30A4O14863 429 aa13.74□□□□□ -0.21
SDHA-215ENST00000512962 SDHBP21912 280 aa13.74□□□□□ -0.21
SDHA-215ENST00000512962 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
SDHA-215ENST00000512962 LIFRP42702 1097 aa13.74□□□□□ -0.21
SDHA-215ENST00000512962 DSG1Q02413 1049 aa13.74□□□□□ -0.21
SDHA-215ENST00000512962 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms