RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RNF181Q9P0P0 153 aa3.22□□□□□ -1.89
PDGFC-208ENST00000512711 USP25Q9UHP3 1055 aa3.22□□□□□ -1.89
PDGFC-208ENST00000512711 AJAP1Q9UKB5 411 aaPredicted RBP3.22□□□□□ -1.89
PDGFC-208ENST00000512711 APOBEC2Q9Y235 224 aaKnown RBP3.22□□□□□ -1.89
PDGFC-208ENST00000512711 TCRBV7S2A1N4TA0A589 114 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 PPFIA4O75335 1185 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 CDKL5O76039 1030 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 POMCP01189 267 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 HLA-DOAP06340 250 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 SNRPA1P09661 255 aaKnown RBP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 HKR1P10072 659 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ITGAMP11215 1152 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 FGFR4P22455 802 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 MTNR1BP49286 362 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ERVK-21P61565 698 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 HSD11B2P80365 405 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 SP140Q13342 867 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 PRR16Q569H4 304 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 RRP12Q5JTH9 1297 aaKnown RBP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ABHD17BQ5VST6 288 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ZNF529Q6P280 563 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ADGRG3Q86Y34 549 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 FAM98AQ8NCA5 519 aaKnown RBP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 SIMC1Q8NDZ2 872 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 CCHCR1Q8TD31 782 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 COQ10AQ96MF6 247 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 ALOXE3Q9BYJ1 711 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 GSTO2Q9H4Y5 243 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 CCM2LQ9NUG4 571 aaPredicted RBP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 HSFX1Q9UBD0 423 aa3.21□□□□□ -1.9
PDGFC-208ENST00000512711 RUVBL1Q9Y265 456 aaKnown RBP3.21□□□□□ -1.9
PDGFC-208ENST00000512711 MASP2O00187 686 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 GPR39O43194 453 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 ESRRBO95718 433 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 MTHFD2P13995 350 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 IL2RBP14784 551 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 ZNF37AP17032 561 aaPredicted RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 ATP5JP18859 108 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 SLC6A4P31645 630 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 SOX5P35711 763 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 NOMO3P69849 1222 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 ATP8B2P98198 1209 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 CCDC142Q17RM4 750 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 NOMO2Q5JPE7 1267 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 CT47A1Q5JQC4 288 aaPredicted RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 OTUD7BQ6GQQ9 843 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 FBXO42Q6P3S6 717 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 PRIMA1Q86XR5 153 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 WDR66Q8TBY9 1149 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 RAB24Q969Q5 203 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 VOPP1Q96AW1 172 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 ZNF764Q96H86 408 aaPredicted RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 NAF1Q96HR8 494 aaKnown RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 PAWRQ96IZ0 340 aaKnown RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 SENP6Q9GZR1 1112 aaPredicted RBP3.2□□□□□ -1.9
PDGFC-208ENST00000512711 FAM30AQ9NZY2 134 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 PTGFRNQ9P2B2 879 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 DNM3Q9UQ16 869 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 PHLDB1Q86UU1 1377 aa3.2□□□□□ -1.9
PDGFC-208ENST00000512711 MAST3O60307 1309 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 MGST3O14880 152 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 FOSP01100 380 aaPredicted RBP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 VIL1P09327 827 aaKnown RBP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 SBK3P0C264 359 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 SPATA31D3P0C874 917 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 CKBP12277 381 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 GCSHP23434 173 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 CXCR5P32302 372 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 CXADRP78310 365 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 MTM1Q13496 603 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 CYP2A13Q16696 494 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 ANO4Q32M45 955 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 COLEC12Q5KU26 742 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 STRIP1Q5VSL9 837 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 SPATA31D4Q6ZUB0 917 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 SEM1Q6ZVN7 128 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 KRT26Q7Z3Y9 468 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 Q8NA96 180 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 NRG4Q8WWG1 115 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 RNF31Q96EP0 1072 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 FUBP3Q96I24 572 aaKnown RBP eCLIP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 BOD1Q96IK1 185 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 ADI1Q9BV57 179 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 UNKLQ9H9P5 680 aaKnown RBP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 RSAD1Q9HA92 442 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 TMEM74BQ9NUR3 256 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 INTUQ9ULD6 942 aa3.19□□□□□ -1.9
PDGFC-208ENST00000512711 MYBBP1AQ9BQG0 1328 aaKnown RBP3.19□□□□□ -1.9
PDGFC-208ENST00000512711 GPANK1O95872 356 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 DDCP20711 480 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 AGXTP21549 392 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 LMO1P25800 156 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 AVPR1BP47901 424 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 RARRES1P49788 294 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 C21orf58P58505 322 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 SIM1P81133 766 aaPredicted RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 MGAT2Q10469 447 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 MPP3Q13368 585 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms