RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 IQCDQ96DY2 449 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 SNX27Q96L92 541 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-204ENST00000512707 IMPG2Q9BZV3 1241 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 SLC38A7Q9NVC3 462 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 C2CD2Q9Y426 696 aa11.75□□□□□ -0.53
PFDN1-204ENST00000512707 ABHD14A-ACY1A0A1B0GW23 586 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 TTC26A0AVF1 554 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 LACTBL1A8MY62 500 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 PMM2O15305 246 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 MGEA5O60502 916 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 AKAP5P24588 427 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 GCLMP48507 274 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 MCCD1P59942 119 aaPredicted RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 DLG4P78352 724 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 CLDN10P78369 228 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 FPGSQ05932 587 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 TRIM14Q14142 442 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 EXOC3L4Q17RC7 722 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 SLC10A6Q3KNW5 377 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 SPECC1LQ69YQ0 1117 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 GLB1LQ6UWU2 654 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 APTXQ7Z2E3 356 aaKnown RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 ECHDC2Q86YB7 292 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 ABI1Q8IZP0 508 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 SMG8Q8ND04 991 aaKnown RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 BEST2Q8NFU1 509 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 URGCPQ8TCY9 931 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 ELAC1Q9H777 363 aaKnown RBP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 RSAD1Q9HA92 442 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 TMEM161AQ9NX61 479 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 HES2Q9Y543 173 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 PCDHB7Q9Y5E2 793 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.74□□□□□ -0.53
PFDN1-204ENST00000512707 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 LAMA3Q16787 3333 aa11.74□□□□□ -0.53
PFDN1-204ENST00000512707 C9IYK1 514 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 AMHP03971 560 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 CSF2RAP15509 400 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 TRIM21P19474 475 aaKnown RBP11.73□□□□□ -0.53
PFDN1-204ENST00000512707 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 KCNJ6P48051 423 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 TRPC3Q13507 836 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 SYCP1Q15431 976 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 WDR44Q5JSH3 913 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 JADE1Q6IE81 842 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 TMEM192Q8IY95 271 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 FBXL13Q8NEE6 735 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 NEK11Q8NG66 645 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 ERGIC2Q96RQ1 377 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 NUP58Q9BVL2 599 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 OSBPL7Q9BZF2 842 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 IL23AQ9NPF7 189 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 INTS13Q9NVM9 706 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 ITGA11Q9UKX5 1188 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 UBQLN1Q9UMX0 589 aaKnown RBP11.73□□□□□ -0.53
PFDN1-204ENST00000512707 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
PFDN1-204ENST00000512707 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 ENPP3O14638 875 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 AP5Z1O43299 807 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 NFICP08651 508 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 KCNE1P15382 129 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 RFX1P22670 979 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 MLH1P40692 756 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 FAM189BP81408 668 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 PPP3CAQ08209 521 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 GPNMBQ14956 572 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 ZACNQ401N2 412 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-204ENST00000512707 SV2AQ7L0J3 742 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 TMC6Q7Z403 805 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 NPAS4Q8IUM7 802 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 VSTM4Q8IW00 320 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 ZNF397Q8NF99 534 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-204ENST00000512707 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 POP1Q99575 1024 aaKnown RBP11.72□□□□□ -0.53
PFDN1-204ENST00000512707 MTMR12Q9C0I1 747 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
PFDN1-204ENST00000512707 KLK14Q9P0G3 267 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 KANSL3Q9P2N6 904 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 COL6A3P12111 3177 aa11.72□□□□□ -0.53
PFDN1-204ENST00000512707 SMIM28A0A1B0GU29 152 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 ARL5CA6NH57 179 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 TEX33O43247 280 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 PTMAP06454 111 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms