RNA–Protein interactions for RNA: ENST00000512537.1

ACSF2-222, Transcript of acyl-CoA synthetase family member 2, human

TSL 2

Gene ACSF2, Length 483 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-222	ENST00000512537	MFSD14A	Q96MC6	490 aa		13.64	□□□□□ -0.23
ACSF2-222	ENST00000512537	FBXO2	Q9UK22	296 aa	Predicted RBP	13.64	□□□□□ -0.23
ACSF2-222	ENST00000512537	MTMR6	Q9Y217	621 aa		13.64	□□□□□ -0.23
ACSF2-222	ENST00000512537	CCDC195	A0A1B0GUA6	201 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537		K7ENM7	598 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	TRAPPC3	O43617	180 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	RFPL2	O75678	378 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	PIGR	P01833	764 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	MARCKS	P29966	332 aa	Predicted RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	ABCD1	P33897	745 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	PLA2G5	P39877	138 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	SOX4	Q06945	474 aa	Predicted RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	MTMR3	Q13615	1198 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	CD300LG	Q6UXG3	332 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	GLYCTK	Q8IVS8	523 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	UBALD2	Q8IYN6	164 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	MYCT1	Q8N699	235 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	KREMEN2	Q8NCW0	462 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	SMG7	Q92540	1137 aa	Known RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	STAM	Q92783	540 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	SNX21	Q969T3	373 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	ZNF707	Q96C28	371 aa	Predicted RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	BICD1	Q96G01	975 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	EPSTI1	Q96J88	318 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	ZMAT2	Q96NC0	199 aa	Known RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	CLSTN3	Q9BQT9	956 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	GOLGA2P5	Q9HBQ8	144 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	WDR6	Q9NNW5	1121 aa	Known RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	STK17A	Q9UEE5	414 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	CCDC39	Q9UFE4	941 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	FBXW11	Q9UKB1	542 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	SORCS3	Q9UPU3	1222 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	SRPRB	Q9Y5M8	271 aa	Known RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	TRIP11	Q15643	1979 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	CIT	O14578	2027 aa		13.63	□□□□□ -0.23
ACSF2-222	ENST00000512537	C2orf16	Q68DN1	1984 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	PODXL	O00592	558 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	HNRNPDL	O14979	420 aa	Known RBP	13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	STX6	O43752	255 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	TRAK2	O60296	914 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	ZMYND10	O75800	440 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	CLTA	P09496	248 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	SPATA31D3	P0C874	917 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	RPL9	P32969	192 aa	Known RBP	13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	DDIT3	P35638	169 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	TXLNA	P40222	546 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	LIG4	P49917	911 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	KYAT1	Q16773	422 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	LIN9	Q5TKA1	542 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	FAM173B	Q6P4H8	233 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	SPATA31D4	Q6ZUB0	917 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	USP49	Q70CQ1	688 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	C3orf58	Q8NDZ4	430 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	PBXIP1	Q96AQ6	731 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	FAM122A	Q96E09	287 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	USP28	Q96RU2	1077 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	PRKD2	Q9BZL6	878 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	KCNH6	Q9H252	994 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	PLEKHA5	Q9HAU0	1116 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	MTRR	Q9UBK8	725 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	TBX20	Q9UMR3	447 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	BACE2	Q9Y5Z0	518 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	VWA8	A3KMH1	1905 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	CLUH	O75153	1309 aa		13.62	□□□□□ -0.23
ACSF2-222	ENST00000512537	TRIO	O75962	3097 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	MEFV	O15553	781 aa	Predicted RBP	13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	ASGR2	P07307	311 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	MYB	P10242	640 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	IGFBP6	P24592	240 aa	Predicted RBP	13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	MATR3	P43243	847 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	1e-6	■□□□□ 9.9
ACSF2-222	ENST00000512537	CEBPZ	Q03701	1054 aa	Known RBP	13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	RAB33A	Q14088	237 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	SLC39A14	Q15043	492 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	SLC10A6	Q3KNW5	377 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	SPECC1	Q5M775	1068 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	ANKS3	Q6ZW76	656 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	KRI1	Q8N9T8	703 aa	Known RBP	13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	ASIC4	Q96FT7	647 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	FIZ1	Q96SL8	496 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	ZHX3	Q9H4I2	956 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	PIDD1	Q9HB75	910 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	FOXD4L1	Q9NU39	408 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	LIMD1	Q9UGP4	676 aa		13.61	□□□□□ -0.23
ACSF2-222	ENST00000512537	MYO10	Q9HD67	2058 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	TTC26	A0AVF1	554 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537		I3L4J1	428 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	SYN3	O14994	580 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	ADAM12	O43184	909 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	CXCL8	P10145	99 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	TKT	P29401	623 aa	Known RBP	13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	HOXA9	P31269	272 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	BRCC3	P46736	316 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	NASP	P49321	788 aa	Predicted RBP	13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	GTF2B	Q00403	316 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	SEZ6	Q53EL9	994 aa		13.6	□□□□□ -0.23
ACSF2-222	ENST00000512537	RRAGB	Q5VZM2	374 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms