RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 SEC13P55735 322 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 BEX3Q00994 111 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 ADGRE1Q14246 886 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 CLUL1Q15846 466 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 AAK1Q2M2I8 961 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 PAPD7Q5XG87 772 aaKnown RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 TAPT1Q6NXT6 567 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 WDR59Q6PJI9 974 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 CXCL17Q6UXB2 119 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 C4orf19Q8IY42 314 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 SYCE1Q8N0S2 351 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 GOLGA6L1Q8N7Z2 621 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 SYTL5Q8TDW5 730 aaPredicted RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 PIGOQ8TEQ8 1089 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 GJA10Q969M2 543 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 MRRFQ96E11 262 aaKnown RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 AGBL1Q96MI9 1066 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSH3-203ENST00000512531 RUSC1Q9BVN2 902 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 CYP39A1Q9NYL5 469 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 AIPL1Q9NZN9 384 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSH3-203ENST00000512531 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 HYOU1Q9Y4L1 999 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 SLC4A7Q9Y6M7 1214 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 V9GYY5 206 aaPredicted RBP10.28□□□□□ -0.76
MSH3-203ENST00000512531 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
MSH3-203ENST00000512531 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 TARSL2A2RTX5 802 aaKnown RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 ANKRD33BA6NCL7 494 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 RBAK-RBAKDNI3L0D1 243 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 K7ENM7 598 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 EML1O00423 815 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 EXOC3O60645 756 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 PSAPP07602 524 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 MYBP10242 640 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 MYCLP12524 364 aaPredicted RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 PLS3P13797 630 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 SMPD1P17405 629 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 PSMC6P62333 389 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 RPS6P62753 249 aaKnown RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 DMP1Q13316 513 aaPredicted RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 PGM5Q15124 567 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 SLC18A3Q16572 532 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 DUSP28Q4G0W2 176 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 FBXO38Q6PIJ6 1188 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 RSRC2Q7L4I2 434 aaKnown RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 TRAPPC11Q7Z392 1133 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 MCPH1Q8NEM0 835 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 CYP2W1Q8TAV3 490 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 TMEM174Q8WUU8 243 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 TAF4BQ92750 862 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 EEF2KMTQ96G04 330 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 UHRF1Q96T88 793 aaPredicted RBP10.27□□□□□ -0.77
MSH3-203ENST00000512531 SENP7Q9BQF6 1050 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 NKX2-4Q9H2Z4 354 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 PXMP2Q9NR77 195 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 INTUQ9ULD6 942 aa10.27□□□□□ -0.77
MSH3-203ENST00000512531 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 BTNL10A8MVZ5 291 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 DDX39AO00148 427 aaKnown RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 KIAA0391O15091 583 aaKnown RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 NKRFO15226 690 aaKnown RBP eCLIP10.26□□□□□ -0.77
MSH3-203ENST00000512531 B4GALT4O60513 344 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 KPNA6O60684 536 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 ARP10275 920 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 CPT1AP50416 773 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 ITIH3Q06033 890 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 GABPB1Q06547 395 aaPredicted RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 ENPEPQ07075 957 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 HSP90B2PQ58FF3 399 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 MIS18BP1Q6P0N0 1132 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 OTOP2Q7RTS6 562 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 HDXQ7Z353 690 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 C12orf56Q8IXR9 622 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 EXOC8Q8IYI6 725 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
MSH3-203ENST00000512531 IFT74Q96LB3 600 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 UIMC1Q96RL1 719 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 PDCD2LQ9BRP1 358 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 SELENOOQ9BVL4 669 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 ST6GALNAC4Q9H4F1 302 aa10.26□□□□□ -0.77
MSH3-203ENST00000512531 NLRC4Q9NPP4 1024 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms