RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CLCNKBP51801 687 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 PPP2R3AQ06190 1150 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 XKR4Q5GH76 650 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 ZBTB41Q5SVQ8 909 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 VN1R2Q8NFZ6 395 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 ADAMTS19Q8TE59 1207 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 POMGNT1Q8WZA1 660 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 B3GALT6Q96L58 329 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 UROC1Q96N76 676 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 CD207Q9UJ71 328 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 HPSEQ9Y251 543 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 A0A1W2PQ27 194 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 A0A1W2PQ64 194 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 A0A1W2PQD8 194 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 KLRC2P26717 231 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 NDUFA8P51970 172 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 SPAG1Q07617 926 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 CUL4BQ13620 913 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 USP41Q3LFD5 358 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 PUS10Q3MIT2 529 aaKnown RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 CNNM4Q6P4Q7 775 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 UNC13DQ70J99 1090 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 RNF168Q8IYW5 571 aaPredicted RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 C18orf25Q96B23 403 aaPredicted RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 PAGE5Q96GU1 130 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 TMEM206Q9H813 350 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 PLEKHA5Q9HAU0 1116 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 CLEC1BQ9P126 229 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 AGO2Q9UKV8 859 aaKnown RBP17.33■□□□□ 0.36
DDX41-214ENST00000512334 FAM50BQ9Y247 325 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.36
DDX41-214ENST00000512334 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 PODXLO00592 558 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 FAM189A1O60320 539 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 CNPP09543 421 aaKnown RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 IL9P15248 144 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 ACOT2P49753 483 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 DSG1Q02413 1049 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 POSTNQ15063 836 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 ENOX2Q16206 610 aaKnown RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 UPP1Q16831 310 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 FAM171A1Q5VUB5 890 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 DCLRE1AQ6PJP8 1040 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 CEP57Q86XR8 500 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 GLIS3Q8NEA6 775 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 RIN2Q8WYP3 895 aaPredicted RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 CASP10Q92851 521 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 MSLNLQ96KJ4 702 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 KLHL5Q96PQ7 755 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 UHRF1Q96T88 793 aaPredicted RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 CPSF3Q9UKF6 684 aaKnown RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 STYXL1Q9Y6J8 313 aa17.32■□□□□ 0.36
DDX41-214ENST00000512334 SPTBN5Q9NRC6 3674 aaKnown RBP17.32■□□□□ 0.36
DDX41-214ENST00000512334 A0A0C4DFX4 3053 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 GRXCR2A6NFK2 248 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 TMEM189-UBE2V1I3L0A0 370 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 EFEMP2O95967 443 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 ELAVL2Q12926 359 aaKnown RBP17.31■□□□□ 0.36
DDX41-214ENST00000512334 SMAD4Q13485 552 aaKnown RBP17.31■□□□□ 0.36
DDX41-214ENST00000512334 KIAA0319Q5VV43 1072 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
DDX41-214ENST00000512334 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
DDX41-214ENST00000512334 APOL5Q9BWW9 433 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 CHST7Q9NS84 486 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 TUBGCP4Q9UGJ1 667 aa17.31■□□□□ 0.36
DDX41-214ENST00000512334 PDCD11Q14690 1871 aaKnown RBP17.31■□□□□ 0.36
DDX41-214ENST00000512334 PVALEFA0A1B0GWK0 134 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 MBTPS2O43462 519 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 XPOTO43592 962 aaKnown RBP17.3■□□□□ 0.36
DDX41-214ENST00000512334 LILRB3O75022 631 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 ADH1AP07327 375 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 EPCAMP16422 314 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 ADSSP30520 456 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 KCNC3Q14003 757 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 ANKRD54Q6NXT1 300 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 ARMCX5Q6P1M9 558 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 TMEM184AQ6ZMB5 413 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 SAAL1Q96ER3 474 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
DDX41-214ENST00000512334 UBQLN1Q9UMX0 589 aaKnown RBP17.3■□□□□ 0.36
DDX41-214ENST00000512334 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
DDX41-214ENST00000512334 FAM237AA0A1B0GTK4 181 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms