RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 DDIT3P35638 169 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 NASPP49321 788 aaPredicted RBP14.78□□□□□ -0.04
CLDND1-224ENST00000511667 MCL1Q07820 350 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 KIAA1841Q6NSI8 718 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 MPZL3Q6UWV2 235 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 HDAC7Q8WUI4 952 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 CALML4Q96GE6 196 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 EPSTI1Q96J88 318 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 NECTIN4Q96NY8 510 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 USP28Q96RU2 1077 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 PLIN2Q99541 437 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 EMILIN2Q9BXX0 1053 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 HAPLN2Q9GZV7 340 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 ST6GALNAC4Q9H4F1 302 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
CLDND1-224ENST00000511667 CACNG4Q9UBN1 327 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 CDH22Q9UJ99 828 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 MYO10Q9HD67 2058 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 CITO14578 2027 aa14.78□□□□□ -0.04
CLDND1-224ENST00000511667 MYH15Q9Y2K3 1946 aa14.77□□□□□ -0.04
CLDND1-224ENST00000511667 SMIM28A0A1B0GU29 152 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 URODP06132 367 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 ADRB2P07550 413 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.05
CLDND1-224ENST00000511667 ANGPT1Q15389 498 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 UPP1Q16831 310 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 USP41Q3LFD5 358 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.05
CLDND1-224ENST00000511667 GPR149Q86SP6 731 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 PIK3R5Q8WYR1 880 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 CDK5RAP3Q96JB5 506 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 ZMAT2Q96NC0 199 aaKnown RBP14.77□□□□□ -0.05
CLDND1-224ENST00000511667 STRA6Q9BX79 667 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 POMKQ9H5K3 350 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.77□□□□□ -0.05
CLDND1-224ENST00000511667 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
CLDND1-224ENST00000511667 LARSQ9P2J5 1176 aaKnown RBP14.77□□□□□ -0.05
CLDND1-224ENST00000511667 C2orf16Q68DN1 1984 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 OTOGLQ3ZCN5 2332 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 SF3B1O75533 1304 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 H0YCG3 227 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 SP100P23497 879 aaPredicted RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 MTHFRP42898 656 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 SMTNP53814 917 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 GTF2BQ00403 316 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 SOX4Q06945 474 aaPredicted RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 RAD51AP2Q09MP3 1159 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 MCM6Q14566 821 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 ZRSR1Q15695 479 aaKnown RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 RTP2Q5QGT7 225 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 CYP26C1Q6V0L0 522 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 HAUS6Q7Z4H7 955 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 GPBP1Q86WP2 473 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 LNX1Q8TBB1 728 aaPredicted RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 LARP4BQ92615 738 aaKnown RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 ZBTB45Q96K62 511 aaPredicted RBP14.76□□□□□ -0.05
CLDND1-224ENST00000511667 UROC1Q96N76 676 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 HINFPQ9BQA5 517 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 STK17AQ9UEE5 414 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 GDAQ9Y2T3 454 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 FRYLO94915 3013 aa14.76□□□□□ -0.05
CLDND1-224ENST00000511667 CASTOR2A6NHX0 329 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 PPP1R37O75864 691 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 SSBP05455 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 ADH1AP07327 375 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 PDIA4P13667 645 aaKnown RBP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 LIG1P18858 919 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 FGFR3P22607 806 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 MARCKSP29966 332 aaPredicted RBP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 ZBTB6Q15916 424 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 SLC10A6Q3KNW5 377 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 ZNF568Q3ZCX4 644 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 KANK3Q6NY19 840 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 DCLRE1AQ6PJP8 1040 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 CCDC105Q8IYK2 499 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 C12orf76Q8N812 135 aaPredicted RBP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 LINC00301Q8NCQ3 95 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 C3orf58Q8NDZ4 430 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 RABGGTAQ92696 567 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 DNAJC19Q96DA6 116 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 B3GALT6Q96L58 329 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 CLIC6Q96NY7 704 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 CLSTN3Q9BQT9 956 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 SFXN1Q9H9B4 322 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 PARVGQ9HBI0 331 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 TSHZ2Q9NRE2 1034 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 TOPORSQ9NS56 1045 aaPredicted RBP14.75□□□□□ -0.05
CLDND1-224ENST00000511667 USTQ9Y2C2 406 aa14.75□□□□□ -0.05
CLDND1-224ENST00000511667 USP24Q9UPU5 2620 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 A0A087X0B3 334 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 TTC26A0AVF1 554 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 FRMD3A2A2Y4 597 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 KLRC2P26717 231 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 CLCNKBP51801 687 aa14.74□□□□□ -0.05
CLDND1-224ENST00000511667 ELAVL2Q12926 359 aaKnown RBP14.74□□□□□ -0.05
CLDND1-224ENST00000511667 NOLC1Q14978 699 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLDND1-224ENST00000511667 RARS2Q5T160 578 aaKnown RBP14.74□□□□□ -0.05
CLDND1-224ENST00000511667 CES5AQ6NT32 575 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms