RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GET4	Q7L5D6	327 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GPR152	Q8TDT2	470 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RUBCN	Q92622	972 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	MTMR9	Q96QG7	549 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CLSTN2	Q9H4D0	955 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PIDD1	Q9HB75	910 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ZDHHC7	Q9NXF8	308 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PCDHA7	Q9UN72	937 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CLIC4	Q9Y696	253 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	7e-6	■■■■■ 28.7
PRKAA1-208	ENST00000511248	POTEM	A6NI47	508 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LRRIQ4	A6NIV6	560 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NEMF	O60524	1076 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	USO1	O60763	962 aa	Known RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TADA2A	O75478	443 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	KIF4A	O95239	1232 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SPATA31C1	P0DKV0	1188 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TXK	P42681	527 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CREM	Q03060	361 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	MAEA	Q7L5Y9	396 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	C1orf210	Q8IVY1	113 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	KRI1	Q8N9T8	703 aa	Known RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ENGASE	Q8NFI3	743 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	HASPIN	Q8TF76	798 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SHD	Q96IW2	340 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CCDC43	Q96MW1	224 aa	Known RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TIGD1	Q96MW7	591 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CLSTN3	Q9BQT9	956 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RPP25	Q9BUL9	199 aa	Known RBP	11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CXCL16	Q9H2A7	254 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GRPEL1	Q9HAV7	217 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ARHGEF3	Q9NR81	526 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SLC2A4RG	Q9NR83	387 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DLGAP2	Q9P1A6	1054 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PARP2	Q9UGN5	583 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NUMBL	Q9Y6R0	609 aa		11.16	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SYCE3	A1L190	88 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CASTOR2	A6NHX0	329 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LAD1	O00515	517 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PTGES	O14684	152 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ADAM12	O43184	909 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	KIN	O60870	393 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ZMYND10	O75800	440 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DCN	P07585	359 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SP9	P0CG40	484 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LIG1	P18858	919 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SDHB	P21912	280 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FSHR	P23945	695 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TOB1	P50616	345 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NTHL1	P78549	312 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CEBPZ	Q03701	1054 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TUSC3	Q13454	348 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SPECC1	Q5M775	1068 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	KIAA2013	Q8IYS2	634 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FSIP1	Q8NA03	581 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PYM1	Q9BRP8	204 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TTPAL	Q9BTX7	342 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TNMD	Q9H2S6	317 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FZD8	Q9H461	694 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TSPY26P	Q9H489	355 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PDZD7	Q9H5P4	517 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DLL3	Q9NYJ7	618 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FBXW11	Q9UKB1	542 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	USP20	Q9Y2K6	914 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248		R4GN57	208 aa		11.15	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TDRD15	B5MCY1	1934 aa	Known RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	DOCK8	Q8NF50	2099 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	MED19	A0JLT2	244 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	RECQL4	O94761	1208 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	CCDC192	P0DO97	292 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	XRCC6	P12956	609 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	IGFBP6	P24592	240 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	STARD6	P59095	220 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	NAB2	Q15742	525 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	FAM187B	Q17R55	369 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	TTC38	Q5R3I4	469 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	FAM171A1	Q5VUB5	890 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	DCLRE1A	Q6PJP8	1040 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	PARM1	Q6UWI2	310 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	CATSPER3	Q86XQ3	398 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	GPR161	Q8N6U8	529 aa	Known RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	MCPH1	Q8NEM0	835 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	LNX1	Q8TBB1	728 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	PIK3R5	Q8WYR1	880 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	BSND	Q8WZ55	320 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	FGF14	Q92915	247 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	CCDC34	Q96HJ3	373 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	PRIMPOL	Q96LW4	560 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	HINFP	Q9BQA5	517 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	FOXQ1	Q9C009	403 aa		11.14	□□□□□ -0.63
PRKAA1-208	ENST00000511248	TMEM60	Q9H2L4	133 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms