RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 COL12A1Q99715 3063 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PAAF1Q9BRP4 392 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 EIF2AQ9BY44 585 aaKnown RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 MINDY3Q9H8M7 445 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 RIC8AQ9NPQ8 531 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 HES2Q9Y543 173 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PTPRBP23467 1997 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 TNRC6BQ9UPQ9 1833 aaKnown RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 ARHGEF37A1IGU5 675 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 DDAH1O94760 285 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 KIF4AO95239 1232 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 LRG1P02750 347 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 SDSP20132 328 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 GBP1P32455 592 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 GNAQP50148 359 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 FAM193AP78312 1265 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 SETQ01105 290 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 LMAN2Q12907 356 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 SEMA3BQ13214 749 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 CYP2U1Q7Z449 544 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 ZNF843Q8N446 348 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 ZSCAN18Q8TBC5 510 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 EVLQ9UI08 416 aaPredicted RBP12.06□□□□□ -0.48
SNF8-207ENST00000509995 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 ATMQ13315 3056 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 GON4LQ3T8J9 2241 aa12.06□□□□□ -0.48
SNF8-207ENST00000509995 TMEM150BA6NC51 233 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 ATG13O75143 517 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 MAPK8P45983 427 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 AP3B2Q13367 1082 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 CWC27Q6UX04 472 aaKnown RBP12.05□□□□□ -0.48
SNF8-207ENST00000509995 TTC8Q8TAM2 541 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 E2F7Q96AV8 911 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 RSPRY1Q96DX4 576 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 SH2D3AQ9BRG2 576 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 NIFKQ9BYG3 293 aaKnown RBP12.05□□□□□ -0.48
SNF8-207ENST00000509995 DISC1Q9NRI5 854 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 GTSE1Q9NYZ3 720 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 MTRRQ9UBK8 725 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 COL4A3BPQ9Y5P4 624 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 CDY1Q9Y6F8 540 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 NUP210Q8TEM1 1887 aaPredicted RBP12.05□□□□□ -0.48
SNF8-207ENST00000509995 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 ADAMTS9Q9P2N4 1935 aa12.05□□□□□ -0.48
SNF8-207ENST00000509995 KIAA1549LQ6ZVL6 1849 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 MOSPD3O75425 235 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 MAFO75444 373 aaPredicted RBP12.04□□□□□ -0.48
SNF8-207ENST00000509995 ELAVL2Q12926 359 aaKnown RBP12.04□□□□□ -0.48
SNF8-207ENST00000509995 TRIM61Q5EBN2 209 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 SRGAP1Q7Z6B7 1085 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 CRYGNQ8WXF5 182 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 ADAMTS14Q8WXS8 1223 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 RILPL2Q969X0 211 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 NXF3Q9H4D5 531 aaKnown RBP12.04□□□□□ -0.48
SNF8-207ENST00000509995 POLR3BQ9NW08 1133 aaPredicted RBP12.04□□□□□ -0.48
SNF8-207ENST00000509995 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 MYO16Q9Y6X6 1858 aa12.04□□□□□ -0.48
SNF8-207ENST00000509995 PTPRQQ9UMZ3 2332 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 A0A087WV48 116 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 ERLIN2O94905 339 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 ENGP17813 658 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
SNF8-207ENST00000509995 ADCY7P51828 1080 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 NAPAP54920 295 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 NOTUMQ6P988 496 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
SNF8-207ENST00000509995 RALYLQ86SE5 291 aaKnown RBP12.03□□□□□ -0.48
SNF8-207ENST00000509995 C11orf74Q86VG3 221 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 LSM14AQ8ND56 463 aaKnown RBP12.03□□□□□ -0.48
SNF8-207ENST00000509995 CCDC51Q96ER9 411 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 NUSAP1Q9BXS6 441 aaKnown RBP12.03□□□□□ -0.48
SNF8-207ENST00000509995 SNTG2Q9NY99 539 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
SNF8-207ENST00000509995 ARID2Q68CP9 1835 aa12.02□□□□□ -0.48
SNF8-207ENST00000509995 PRRG1O14668 218 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 APBB3O95704 486 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 CYP3A4P08684 503 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 AKAP5P24588 427 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 TUSC3Q13454 348 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 XKR3Q5GH77 459 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 HACE1Q8IYU2 909 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 PIGKQ92643 395 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 ZFYVE19Q96K21 471 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 TMEM209Q96SK2 561 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 JPH2Q9BR39 696 aaPredicted RBP12.02□□□□□ -0.49
SNF8-207ENST00000509995 TRIM6Q9C030 488 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms