RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 MPZL3Q6UWV2 235 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 GPR65Q8IYL9 337 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 CEP120Q8N960 986 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-204ENST00000509994 ZNF707Q96C28 371 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-204ENST00000509994 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
SCARB2-204ENST00000509994 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 TIPINQ9BVW5 301 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.11□□□□□ -0.63
SCARB2-204ENST00000509994 FBXW11Q9UKB1 542 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
SCARB2-204ENST00000509994 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
SCARB2-204ENST00000509994 MIA3Q5JRA6 1907 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 SMIM28A0A1B0GU29 152 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 PODXLO00592 558 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCARB2-204ENST00000509994 MCF2P10911 925 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 ELF1P32519 619 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 MCM4P33991 863 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 BRCC3P46736 316 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 CLCN5P51795 746 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 NUBP1P53384 320 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 NTHL1P78549 312 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 NOLC1Q14978 699 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCARB2-204ENST00000509994 IL17AQ16552 155 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 CALML4Q96GE6 196 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
SCARB2-204ENST00000509994 PPP1R10Q96QC0 940 aaKnown RBP11.1□□□□□ -0.63
SCARB2-204ENST00000509994 ZHX3Q9H4I2 956 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 TMEM134Q9H6X4 195 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 EPS15L1Q9UBC2 864 aa11.1□□□□□ -0.63
SCARB2-204ENST00000509994 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-204ENST00000509994 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 ADAM12O43184 909 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 C1RP00736 705 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 LRG1P02750 347 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 SRFP11831 508 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 LAMP2P13473 410 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 PLS3P13797 630 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 UBA7P41226 1012 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 NAB2Q15742 525 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 UPP1Q16831 310 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 SEZ6Q53EL9 994 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 SPECC1Q5M775 1068 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 LILRA6Q6PI73 481 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 DAW1Q8N136 415 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 SLC44A3Q8N4M1 653 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 SNX27Q96L92 541 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 RTP3Q9BQQ7 232 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 ARHGAP28Q9P2N2 729 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 MTRRQ9UBK8 725 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-204ENST00000509994 KCNG1Q9UIX4 513 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 NUMBLQ9Y6R0 609 aa11.09□□□□□ -0.63
SCARB2-204ENST00000509994 NPHP3-ACAD11A0A0J9YXS1 232 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 H0YCG3 227 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 TMEM189-UBE2V1I3L0A0 370 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 K7ENM7 598 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 CLDN3O15551 220 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 FAM13AO94988 1023 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 AOC1P19801 751 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 FGFR3P22607 806 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 GUCY2CP25092 1073 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 MARCKSP29966 332 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 MCM2P49736 904 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 LIG4P49917 911 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 SOX4Q06945 474 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 MAPK7Q13164 816 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 HTR4Q13639 388 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 CWF19L1Q69YN2 538 aaKnown RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 MTSS1LQ765P7 747 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 GPBP1Q86WP2 473 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 C18orf25Q96B23 403 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 ZBTB45Q96K62 511 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 TBC1D17Q9HA65 648 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 HCFC1R1Q9NWW0 138 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 CDH7Q9ULB5 785 aa11.08□□□□□ -0.64
SCARB2-204ENST00000509994 ZFP37Q9Y6Q3 630 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-204ENST00000509994 TCHHQ07283 1943 aa11.07□□□□□ -0.64
SCARB2-204ENST00000509994 VPS13AQ96RL7 3174 aa11.07□□□□□ -0.64
SCARB2-204ENST00000509994 H7C4K7 107 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms