RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 EFHC2Q5JST6 749 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 GLRA4Q5JXX5 417 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CES5AQ6NT32 575 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PXYLP1Q8TE99 480 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 AFAP1L1Q8TED9 768 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 TSPAN18Q96SJ8 248 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CGRRF1Q99675 332 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 TMEM134Q9H6X4 195 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PPANQ9NQ55 473 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 FAM170AA1A519 330 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PSMD10O75832 226 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 POMCP01189 267 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PDGFRBP09619 1106 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 MAN1A1P33908 653 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PSMC1P62191 440 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 LMNB2Q03252 620 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 RBL2Q08999 1139 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 PPM1LQ5SGD2 360 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CASC4Q6P4E1 433 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ZPBP2Q6X784 338 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ADGRF2Q8IZF7 708 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 FBXO22Q8NEZ5 403 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 TTC1Q99614 292 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 KCNMB3Q9NPA1 279 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 DYRK4Q9NR20 520 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 THG1LQ9NWX6 298 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 SOWAHBA6NEL2 793 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 FAM200BP0CF97 657 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 LAG3P18627 525 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 RARRES1P49788 294 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 EVX2Q03828 476 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ITIH3Q06033 890 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 SFSWAPQ12872 951 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 PTPAQ15257 358 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CDO1Q16878 200 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 RHOT2Q8IXI1 618 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 DHX38Q92620 1227 aaKnown RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 INPP4AQ96PE3 977 aaPredicted RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 ABI2Q9NYB9 513 aaPredicted RBP5.47□□□□□ -1.53
PHF3-210ENST00000509876 PAPPAQ13219 1627 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ANKRD36CQ5JPF3 1778 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 FRMPD4Q14CM0 1322 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CNTNAP2Q9UHC6 1331 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 SMIM22K7EJ46 135 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 HLA-DRAP01903 254 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 DNAJB2P25686 324 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 TM4SF4P48230 202 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ACLYP53396 1101 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 EPHB1P54762 984 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 RAB30Q15771 203 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CCL14Q16627 93 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 ANKRD40Q6AI12 368 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CCDC149Q6ZUS6 474 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CCDC170Q8IYT3 715 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 CCNYQ8ND76 341 aa5.47□□□□□ -1.53
PHF3-210ENST00000509876 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.47□□□□□ -1.53
PHF3-210ENST00000509876 CASTOR2A6NHX0 329 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 ARVCFO00192 962 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 MCF2LO15068 1137 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 CAND2O75155 1236 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 FMO5P49326 533 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 RAD51Q06609 339 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 KAZNQ674X7 775 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 PASD1Q8IV76 773 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 IL31RAQ8NI17 732 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 TBC1D31Q96DN5 1066 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 AGPAT3Q9NRZ7 376 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 ANAPC5Q9UJX4 755 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 IPPQ9Y573 584 aa5.46□□□□□ -1.53
PHF3-210ENST00000509876 DNM1LO00429 736 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 BUB1O43683 1085 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CCND3P30281 292 aaPredicted RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 NOMO2Q5JPE7 1267 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 KIAA1755Q5JYT7 1200 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CCDC25Q86WR0 208 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CDR2LQ86X02 465 aaPredicted RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 ADSSL1Q8N142 457 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CCDC63Q8NA47 563 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 WNK3Q9BYP7 1800 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 ZBTB22O15209 634 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 FGFR4P22455 802 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 HARS2P49590 506 aaKnown RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 SULT1E1P49888 294 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 VAV2P52735 878 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 NOP14P78316 857 aaKnown RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 NFE2Q16621 373 aaPredicted RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 GOLGA7BQ2TAP0 167 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 TMEM119Q4V9L6 283 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 METTL16Q86W50 562 aaKnown RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 ZNF384Q8TF68 577 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 HAUS4Q9H6D7 363 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 NGRNQ9NPE2 291 aaKnown RBP5.46□□□□□ -1.54
PHF3-210ENST00000509876 PCDHB8Q9UN66 801 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 RASSF10A6NK89 507 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 PFKMP08237 780 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 IRF1P10914 325 aa5.46□□□□□ -1.54
PHF3-210ENST00000509876 CD52P31358 61 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms