RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 ZNF623O75123 536 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 TIMP1P01033 207 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 GYPCP04921 128 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 SKIP12755 728 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 ACTN1P12814 892 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 APBA1Q02410 837 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 TMEM132DQ14C87 1099 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 SLC24A5Q71RS6 500 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 MRPL10Q7Z7H8 261 aaKnown RBP16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 RNF169Q8NCN4 708 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 NEK11Q8NG66 645 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 ANKRD36BP1Q96IX9 119 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 INTS2Q9H0H0 1204 aaKnown RBP16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 C2CD2Q9Y426 696 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 C9IYK1 514 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 LRRN2O75325 713 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 TNNC2P02585 160 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 PTMAP06454 111 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 RAG1P15918 1043 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 ATF7P17544 494 aaPredicted RBP16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 TRIM14Q14142 442 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 TCTN1Q2MV58 587 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 GLRA4Q5JXX5 417 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 TRAPPC11Q7Z392 1133 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 PPFIBP1Q86W92 1011 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 ECHDC2Q86YB7 292 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 LMO3Q8TAP4 145 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 CPLX3Q8WVH0 158 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 SEMA4DQ92854 862 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 ZMAT2Q96NC0 199 aaKnown RBP16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 NUP58Q9BVL2 599 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 RNF19AQ9NV58 838 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 RAB20Q9NX57 234 aa16.02■□□□□ 0.15
SNCAIP-211ENST00000509023 ALPK3Q96L96 1907 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 PHACTR2O75167 634 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 RFC2P35250 354 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 PIK3CAP42336 1068 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 XKR4Q5GH76 650 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 CCDC186Q7Z3E2 898 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 NT5DC4Q86YG4 428 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 TTYH3Q9C0H2 523 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 C1orf112Q9NSG2 853 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 DERAQ9Y315 318 aa16.01■□□□□ 0.15
SNCAIP-211ENST00000509023 NOL4O94818 638 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 VNN1O95497 513 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 HLA-DRAP01903 254 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 TPM1P09493 284 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 CASP14P31944 242 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 MLH1P40692 756 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 FIGNQ5HY92 759 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 DPY19L2P1Q6NXN4 242 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 PGBD4Q96DM1 585 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 ZFP42Q96MM3 310 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 GANQ9H2C0 597 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 SIX2Q9NPC8 291 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.15
SNCAIP-211ENST00000509023 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 GIT1Q9Y2X7 761 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 TRIP11Q15643 1979 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 SMIM28A0A1B0GU29 152 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 ENPP3O14638 875 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 KCNE1P15382 129 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
SNCAIP-211ENST00000509023 NCOA4Q13772 614 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 KLHDC7AQ5VTJ3 777 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 SCARA3Q6AZY7 606 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
SNCAIP-211ENST00000509023 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
SNCAIP-211ENST00000509023 TMEM130Q8N3G9 435 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 C1orf127Q8N9H9 656 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 GAD1Q99259 594 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 RSAD1Q9HA92 442 aa16■□□□□ 0.15
SNCAIP-211ENST00000509023 RNF225M0QZC1 329 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 CST3P01034 146 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 CSF2RAP15509 400 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 ADKP55263 362 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 FAM189BP81408 668 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 LRMPQ12912 555 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 VWCEQ96DN2 955 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 IQCDQ96DY2 449 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 RPS6KC1Q96S38 1066 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 PI4K2AQ9BTU6 479 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 CAPN11Q9UMQ6 739 aa15.99■□□□□ 0.15
SNCAIP-211ENST00000509023 PDCD11Q14690 1871 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms