RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 SMC3Q9UQE7 1217 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 PLXNA3P51805 1871 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 I3L4J1 428 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 TRAPPC3O43617 180 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 NARSO43776 548 aaKnown RBP13.7□□□□□ -0.22
PDPN-208ENST00000509009 HNRNPA1P09651 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDPN-208ENST00000509009 PLA2G4BP0C869 781 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 KCNE1P15382 129 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 NPR3P17342 541 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 OR1D2P34982 312 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 BRCC3P46736 316 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 TMEM119Q4V9L6 283 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 C3orf58Q8NDZ4 430 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 NXPE3Q969Y0 559 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 MTRRQ9UBK8 725 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 DUSP12Q9UNI6 340 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
PDPN-208ENST00000509009 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
PDPN-208ENST00000509009 NPHP3-ACAD11A0A0J9YXS1 232 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 MEFVO15553 781 aaPredicted RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 TOM1L1O75674 476 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 SMTNP53814 917 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 NTHL1P78549 312 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 STRN3Q13033 797 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 SLC10A6Q3KNW5 377 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 LIN9Q5TKA1 542 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 GRASPQ7Z6J2 395 aaPredicted RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 SNX27Q96L92 541 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 TBC1D32Q96NH3 1257 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 IRF2BPLQ9H1B7 796 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 SLC38A7Q9NVC3 462 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 KCND2Q9NZV8 630 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
PDPN-208ENST00000509009 BACE2Q9Y5Z0 518 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 DENND4AQ7Z401 1863 aa13.69□□□□□ -0.22
PDPN-208ENST00000509009 DOCK6Q96HP0 2047 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 ANHXE9PGG2 379 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 H0Y858 1186 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 CCL16O15467 120 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 SLC26A4O43511 780 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 PI15O43692 258 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 C8AP07357 584 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 FSHRP23945 695 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 HOXA9P31269 272 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 RPL9P32969 192 aaKnown RBP13.68□□□□□ -0.22
PDPN-208ENST00000509009 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 ANKS3Q6ZW76 656 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 FLCNQ8NFG4 579 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
PDPN-208ENST00000509009 C18orf25Q96B23 403 aaPredicted RBP13.68□□□□□ -0.22
PDPN-208ENST00000509009 AK8Q96MA6 479 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 CNTN3Q9P232 1028 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 WNT16Q9UBV4 365 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 FBXL21Q9UKT6 434 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
PDPN-208ENST00000509009 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
PDPN-208ENST00000509009 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
PDPN-208ENST00000509009 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 PODXLO00592 558 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 CFHP08603 1231 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 UBA7P41226 1012 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 MCL1Q07820 350 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 CWF19L1Q69YN2 538 aaKnown RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 RTL10Q7L3V2 364 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 GET4Q7L5D6 327 aaPredicted RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 SIX5Q8N196 739 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 LRRC15Q8TF66 581 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 HAPLN2Q9GZV7 340 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 LARSQ9P2J5 1176 aaKnown RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 KMT2EQ8IZD2 1858 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
PDPN-208ENST00000509009 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
PDPN-208ENST00000509009 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 CLDN3O15551 220 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 XYLBO75191 536 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 ABLIM3O94929 683 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 POU2F2P09086 479 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 SRFP11831 508 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 AOC1P19801 751 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms