RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TIPINQ9BVW5 301 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 BLOC1S4Q9NUP1 217 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 FBXW11Q9UKB1 542 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 CLUHO75153 1309 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 I3L4J1 428 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 B3GAT3O94766 335 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 MCF2P10911 925 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 NUBP1P53384 320 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
LMNA-222ENST00000508500 MPZL3Q6UWV2 235 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 RSAD2Q8WXG1 361 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 ACSF2Q96CM8 615 aaPredicted RBP17.77■□□□□ 0.44
LMNA-222ENST00000508500 CCDC94Q9BW85 323 aaPredicted RBP17.77■□□□□ 0.44
LMNA-222ENST00000508500 PRKD2Q9BZL6 878 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 KCNK12Q9HB15 430 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 ZDHHC7Q9NXF8 308 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.44
LMNA-222ENST00000508500 DPP7Q9UHL4 492 aa17.77■□□□□ 0.44
LMNA-222ENST00000508500 ZFHX2Q9C0A1 2572 aaPredicted RBP17.76■□□□□ 0.43
LMNA-222ENST00000508500 KCNE1P15382 129 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
LMNA-222ENST00000508500 NCKAP1LP55160 1127 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 CREMQ03060 361 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 SLC10A6Q3KNW5 377 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
LMNA-222ENST00000508500 DDX27Q96GQ7 796 aaKnown RBP17.76■□□□□ 0.43
LMNA-222ENST00000508500 AK8Q96MA6 479 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 ACAP3Q96P50 834 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 REEP2Q9BRK0 252 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 TCHPQ9BT92 498 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 KCND2Q9NZV8 630 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 CNTN3Q9P232 1028 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 MTRRQ9UBK8 725 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 SCN1AP35498 2009 aa17.76■□□□□ 0.43
LMNA-222ENST00000508500 PROB1E7EW31 1015 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 NARSO43776 548 aaKnown RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 HARSP12081 509 aaKnown RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 OR1D2P34982 312 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 ELAVL2Q12926 359 aaKnown RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 PTPAQ15257 358 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 APBB1IPQ7Z5R6 666 aaPredicted RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 KCNN1Q92952 543 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 C18orf25Q96B23 403 aaPredicted RBP17.75■□□□□ 0.43
LMNA-222ENST00000508500 CDK5RAP3Q96JB5 506 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 UROC1Q96N76 676 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 FAM86C1Q9NVL1 165 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 EPS15L1Q9UBC2 864 aa17.75■□□□□ 0.43
LMNA-222ENST00000508500 SLC26A4O43511 780 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 TOM1L1O75674 476 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 PLCG1P19174 1290 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 GBP2P32456 591 aaPredicted RBP17.74■□□□□ 0.43
LMNA-222ENST00000508500 NTHL1P78549 312 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 TDGQ13569 410 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 RAB33AQ14088 237 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 DHX8Q14562 1220 aaKnown RBP17.74■□□□□ 0.43
LMNA-222ENST00000508500 MCM6Q14566 821 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 ELMSAN1Q6PJG2 1045 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 TMEM105Q8N8V8 129 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 ST13P5Q8NFI4 369 aaPredicted RBP17.74■□□□□ 0.43
LMNA-222ENST00000508500 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 PIDD1Q9HB75 910 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 TOPORSQ9NS56 1045 aaPredicted RBP17.74■□□□□ 0.43
LMNA-222ENST00000508500 ANKFY1Q9P2R3 1169 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 CLIC4Q9Y696 253 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 TCHHQ07283 1943 aa17.74■□□□□ 0.43
LMNA-222ENST00000508500 DMDP11532 3685 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 PODXLO00592 558 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
LMNA-222ENST00000508500 C8AP07357 584 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 NPR3P17342 541 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 LONP1P36776 959 aaKnown RBP17.73■□□□□ 0.43
LMNA-222ENST00000508500 UBA7P41226 1012 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 ZNF131P52739 623 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 SMTNP53814 917 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 MCL1Q07820 350 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 STRN3Q13033 797 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 RESTQ13127 1097 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 GRASPQ7Z6J2 395 aaPredicted RBP17.73■□□□□ 0.43
LMNA-222ENST00000508500 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 RAD54LQ92698 747 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 IGSF9Q9P2J2 1179 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 ODF2LQ9ULJ1 636 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 DUSP12Q9UNI6 340 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 BACE2Q9Y5Z0 518 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
LMNA-222ENST00000508500 TSC2P49815 1807 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 VPS37CA5D8V6 355 aaPredicted RBP17.72■□□□□ 0.43
LMNA-222ENST00000508500 CCL16O15467 120 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 FAM189A1O60320 539 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 TBC1D4O60343 1298 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 LAMP2P13473 410 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 TNFSF9P41273 254 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 SPAG1Q07617 926 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms