RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SETD5Q9C0A6 1442 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 MAPKBP1O60336 1514 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 AGAP14A8MT82 685 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 TBX10O75333 385 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 TMEM63AO94886 807 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 CRTAMO95727 393 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 S100A6P06703 90 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF865P0CJ78 1059 aaPredicted RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 ACADMP11310 421 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 MYF5P13349 255 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 JUPP14923 745 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 RAG1P15918 1043 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 C5AR1P21730 350 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 ADKP55263 362 aaKnown RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 FRG1Q14331 258 aaKnown RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 KYNUQ16719 465 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 C2orf76Q3KRA6 126 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 USP39Q53GS9 565 aaKnown RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 SFMBT2Q5VUG0 894 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 BROXQ5VW32 411 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 USP45Q70EL2 814 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 TTC39CQ8N584 583 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 TUBA1CQ9BQE3 449 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 SENP6Q9GZR1 1112 aaPredicted RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 DNAJC18Q9H819 358 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 C5AR2Q9P296 337 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 FEM1BQ9UK73 627 aa8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 CPSF3Q9UKF6 684 aaKnown RBP8.09□□□□□ -1.12
PDGFRA-206ENST00000508170 PLA2G6O60733 806 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 LRG1P02750 347 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 AKT1P31749 480 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 THPOP40225 353 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 RAD23AP54725 363 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 NFIAQ12857 509 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 SNX1Q13596 522 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 CCDC57Q2TAC2 916 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 STXBP5Q5T5C0 1151 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 OLFML2BQ68BL8 750 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 SZRD1Q7Z422 152 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 HERC6Q8IVU3 1022 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 ZFPM1Q8IX07 1006 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 DCAF11Q8TEB1 546 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 PDCD2LQ9BRP1 358 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 SPXQ9BT56 116 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 CD244Q9BZW8 370 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 NDST4Q9H3R1 872 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 COPS7BQ9H9Q2 264 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 EIF2B3Q9NR50 452 aaKnown RBP8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 USP40Q9NVE5 1235 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
PDGFRA-206ENST00000508170 C16orf96A6NNT2 1141 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ASGR1P07306 291 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TMIGD3P0DMS9 266 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ATP2A2P16615 1042 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TRIM21P19474 475 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CDH3P22223 829 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CIITAP33076 1130 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 RGS2P41220 211 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 FCRLBQ6BAA4 426 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 WDR93Q6P2C0 686 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 DRICH1Q6PGQ1 229 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TMTC3Q6ZXV5 915 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM9CQ8IZT9 166 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TEKT4Q8WW24 435 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 AUTS2Q8WXX7 1259 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PTPRN2Q92932 1015 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ACAP3Q96P50 834 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PHF20Q9BVI0 1012 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 REXO4Q9GZR2 422 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 GBP3Q9H0R5 595 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 ERVMER34-1Q9H9K5 563 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TOR4AQ9NXH8 423 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 NINJ2Q9NZG7 142 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 H2AFY2Q9P0M6 372 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CACNG4Q9UBN1 327 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SRP68Q9UHB9 627 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 BIN1O00499 593 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 APOL1O14791 398 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 AFPP02771 609 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 VAV1P15498 845 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 PDCP20941 246 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SFPQP23246 707 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 SEC24CP53992 1094 aa8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 HNRNPUQ00839 825 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDGFRA-206ENST00000508170 CHAF1BQ13112 559 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms