RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 CD300LGQ6UXG3 332 aa22.82■■□□□ 1.24
CLDND1-216ENST00000507944 MFSD1Q9H3U5 465 aa22.82■■□□□ 1.24
CLDND1-216ENST00000507944 KCND2Q9NZV8 630 aa22.82■■□□□ 1.24
CLDND1-216ENST00000507944 EPS15L1Q9UBC2 864 aa22.82■■□□□ 1.24
CLDND1-216ENST00000507944 ABLIM1O14639 778 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 TRAPPC3O43617 180 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 NUBP1P53384 320 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 SOX4Q06945 474 aaPredicted RBP22.81■■□□□ 1.24
CLDND1-216ENST00000507944 TMEM119Q4V9L6 283 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 LIN9Q5TKA1 542 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 TMEM161BQ8NDZ6 487 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 DDX27Q96GQ7 796 aaKnown RBP22.81■■□□□ 1.24
CLDND1-216ENST00000507944 ZBTB45Q96K62 511 aaPredicted RBP22.81■■□□□ 1.24
CLDND1-216ENST00000507944 AK8Q96MA6 479 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 SLC38A7Q9NVC3 462 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLDND1-216ENST00000507944 DUSP12Q9UNI6 340 aa22.81■■□□□ 1.24
CLDND1-216ENST00000507944 HNRNPA1P09651 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
CLDND1-216ENST00000507944 HARSP12081 509 aaKnown RBP22.8■■□□□ 1.24
CLDND1-216ENST00000507944 OR1D2P34982 312 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 RAB33AQ14088 237 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 PPM1LQ5SGD2 360 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 C3orf58Q8NDZ4 430 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 RSAD2Q8WXG1 361 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 SNX27Q96L92 541 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 ZMAT2Q96NC0 199 aaKnown RBP22.8■■□□□ 1.24
CLDND1-216ENST00000507944 MTRRQ9UBK8 725 aa22.8■■□□□ 1.24
CLDND1-216ENST00000507944 NPHP3-ACAD11A0A0J9YXS1 232 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 SLC26A4O43511 780 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 TOM1L1O75674 476 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 C8AP07357 584 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 MAPTP10636 758 aaKnown RBP22.79■■□□□ 1.24
CLDND1-216ENST00000507944 LAMP2P13473 410 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 KCNE1P15382 129 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 TKTP29401 623 aaKnown RBP22.79■■□□□ 1.24
CLDND1-216ENST00000507944 BRCC3P46736 316 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 ARSHQ5FYA8 562 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 ASTLQ6HA08 431 aaPredicted RBP22.79■■□□□ 1.24
CLDND1-216ENST00000507944 GET4Q7L5D6 327 aaPredicted RBP22.79■■□□□ 1.24
CLDND1-216ENST00000507944 TMEM105Q8N8V8 129 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 NXPE3Q969Y0 559 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 PHOX2BQ99453 314 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 FBXL21Q9UKT6 434 aa22.79■■□□□ 1.24
CLDND1-216ENST00000507944 I3L4J1 428 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 PODXLO00592 558 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 NARSO43776 548 aaKnown RBP22.78■■□□□ 1.24
CLDND1-216ENST00000507944 UBA7P41226 1012 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 CLCN5P51795 746 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 CACNB1Q02641 598 aaPredicted RBP22.78■■□□□ 1.24
CLDND1-216ENST00000507944 ZPBP2Q6X784 338 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 ANKS3Q6ZW76 656 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 BRAPQ7Z569 592 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 GRASPQ7Z6J2 395 aaPredicted RBP22.78■■□□□ 1.24
CLDND1-216ENST00000507944 SLC44A3Q8N4M1 653 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 CALML4Q96GE6 196 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 IRF2BPLQ9H1B7 796 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 CNTN3Q9P232 1028 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 LARSQ9P2J5 1176 aaKnown RBP22.78■■□□□ 1.24
CLDND1-216ENST00000507944 ANKFY1Q9P2R3 1169 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 BACE2Q9Y5Z0 518 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 CDY1Q9Y6F8 540 aa22.78■■□□□ 1.24
CLDND1-216ENST00000507944 GALR2O43603 387 aaPredicted RBP22.77■■□□□ 1.24
CLDND1-216ENST00000507944 BMP15O95972 392 aa22.77■■□□□ 1.24
CLDND1-216ENST00000507944 FSHRP23945 695 aa22.77■■□□□ 1.24
CLDND1-216ENST00000507944 HOXA9P31269 272 aa22.77■■□□□ 1.24
CLDND1-216ENST00000507944 NOLC1Q14978 699 aaKnown RBP eCLIP22.77■■□□□ 1.24
CLDND1-216ENST00000507944 UVSSAQ2YD98 709 aa22.77■■□□□ 1.24
CLDND1-216ENST00000507944 AXDND1Q5T1B0 1012 aaPredicted RBP22.77■■□□□ 1.24
CLDND1-216ENST00000507944 RSPO2Q6UXX9 243 aaPredicted RBP22.77■■□□□ 1.24
CLDND1-216ENST00000507944 FLCNQ8NFG4 579 aa22.77■■□□□ 1.24
CLDND1-216ENST00000507944 H0YCG3 227 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 CCL16O15467 120 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 CLDN3O15551 220 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 MEFVO15553 781 aaPredicted RBP22.76■■□□□ 1.23
CLDND1-216ENST00000507944 XYLBO75191 536 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 RPL9P32969 192 aaKnown RBP22.76■■□□□ 1.23
CLDND1-216ENST00000507944 SLC10A6Q3KNW5 377 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 SEZ6Q53EL9 994 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 SLC7A14Q8TBB6 771 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 C18orf25Q96B23 403 aaPredicted RBP22.76■■□□□ 1.23
CLDND1-216ENST00000507944 ODF2LQ9ULJ1 636 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 POLIQ9UNA4 740 aa22.76■■□□□ 1.23
CLDND1-216ENST00000507944 H0Y858 1186 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 NPR3P17342 541 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 LONP1P36776 959 aaKnown RBP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 MATR3P43243 847 aaKnown RBP eCLIP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 NCKAP1LP55160 1127 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 NTHL1P78549 312 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 MCL1Q07820 350 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 DHX8Q14562 1220 aaKnown RBP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 SF3A1Q15459 793 aaKnown RBP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 RTL10Q7L3V2 364 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 HAUS6Q7Z4H7 955 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 GPBP1Q86WP2 473 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 SIX5Q8N196 739 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 ATOH1Q92858 354 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 WNT16Q9UBV4 365 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 NUB1Q9Y5A7 615 aa22.75■■□□□ 1.23
CLDND1-216ENST00000507944 ZFP37Q9Y6Q3 630 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-216ENST00000507944 ANHXE9PGG2 379 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms