RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TRIM14Q14142 442 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 EPC2Q52LR7 807 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 TDRD10Q5VZ19 366 aaKnown RBP18.87■□□□□ 0.61
RNF4-209ENST00000507784 MRPL10Q7Z7H8 261 aaKnown RBP18.87■□□□□ 0.61
RNF4-209ENST00000507784 RTN4RL1Q86UN2 441 aaPredicted RBP18.87■□□□□ 0.61
RNF4-209ENST00000507784 FBXL13Q8NEE6 735 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 APBB2Q92870 758 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 TRIM43Q96BQ3 446 aaPredicted RBP18.87■□□□□ 0.61
RNF4-209ENST00000507784 MTMR12Q9C0I1 747 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
RNF4-209ENST00000507784 A0A0U1RQF3 1178 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 KIAA0355O15063 1070 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 TIMP1P01033 207 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 HLA-DRAP01903 254 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 CASP14P31944 242 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 APBA1Q02410 837 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 TRPC3Q13507 836 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 ZACNQ401N2 412 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 TRAPPC11Q7Z392 1133 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 CACNA2D4Q7Z3S7 1137 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 ECHDC2Q86YB7 292 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 TAS1R2Q8TE23 839 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 SEMA4DQ92854 862 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 CXCL16Q9H2A7 254 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
RNF4-209ENST00000507784 R3HCC1Q9Y3T6 440 aaKnown RBP18.86■□□□□ 0.61
RNF4-209ENST00000507784 AKR1B15C9JRZ8 316 aaPredicted RBP18.85■□□□□ 0.61
RNF4-209ENST00000507784 ENPP3O14638 875 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 PMM2O15305 246 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 ZNF623O75123 536 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 KRT19P08727 400 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 RFC2P35250 354 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 ADKP55263 362 aaKnown RBP18.85■□□□□ 0.61
RNF4-209ENST00000507784 GSDMDP57764 484 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 POLR2FP61218 127 aaKnown RBP18.85■□□□□ 0.61
RNF4-209ENST00000507784 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 GLRA4Q5JXX5 417 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 TRIM65Q6PJ69 517 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 SLC24A5Q71RS6 500 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 LINC01599Q8WXQ3 324 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 RPS6KC1Q96S38 1066 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 TRAIPQ9BWF2 469 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 NLRC4Q9NPP4 1024 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 GIT1Q9Y2X7 761 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 DERAQ9Y315 318 aa18.85■□□□□ 0.61
RNF4-209ENST00000507784 PDCD11Q14690 1871 aaKnown RBP18.84■□□□□ 0.61
RNF4-209ENST00000507784 MEIS3P2A8K0S8 358 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 C9IYK1 514 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 EPHB6O15197 1021 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 LRRN2O75325 713 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 VNN1O95497 513 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 CXCL10P02778 98 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 GYPCP04921 128 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 GUCY2FP51841 1108 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 NCOA4Q13772 614 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 COL13A1Q5TAT6 717 aaPredicted RBP18.84■□□□□ 0.61
RNF4-209ENST00000507784 KLHDC7AQ5VTJ3 777 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 GJB7Q6PEY0 223 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 ALKAL1Q6UXT8 129 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 AGMOQ6ZNB7 445 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 NT5DC4Q86YG4 428 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 ZNF397Q8NF99 534 aaPredicted RBP18.84■□□□□ 0.61
RNF4-209ENST00000507784 BEST2Q8NFU1 509 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 IQCDQ96DY2 449 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 ZMAT2Q96NC0 199 aaKnown RBP18.84■□□□□ 0.61
RNF4-209ENST00000507784 GAD1Q99259 594 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 PI4K2AQ9BTU6 479 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 SIX2Q9NPC8 291 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 PLCB1Q9NQ66 1216 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 DPP3Q9NY33 737 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 CNTN3Q9P232 1028 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 CAPN11Q9UMQ6 739 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 LUC7L2Q9Y383 392 aaKnown RBP18.84■□□□□ 0.61
RNF4-209ENST00000507784 COQ4Q9Y3A0 265 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 C2CD2Q9Y426 696 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 ALPK3Q96L96 1907 aa18.84■□□□□ 0.61
RNF4-209ENST00000507784 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 CCDC85CA6NKD9 419 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 XPOTO43592 962 aaKnown RBP18.83■□□□□ 0.6
RNF4-209ENST00000507784 NOL4O94818 638 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.6
RNF4-209ENST00000507784 MLH1P40692 756 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 FXR1P51114 621 aaKnown RBP eCLIP18.83■□□□□ 0.6
RNF4-209ENST00000507784 ARID5BQ14865 1188 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 TMEM130Q8N3G9 435 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 LMO3Q8TAP4 145 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 NT5C1BQ96P26 610 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 GANQ9H2C0 597 aa18.83■□□□□ 0.6
RNF4-209ENST00000507784 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms