RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 FAM212AQ96EL1 285 aa23.57■■□□□ 1.36
SPCS3-203ENST00000507678 NCAPGQ9BPX3 1015 aa23.57■■□□□ 1.36
SPCS3-203ENST00000507678 MSTO1Q9BUK6 570 aa23.57■■□□□ 1.36
SPCS3-203ENST00000507678 RASAL2Q9UJF2 1139 aa23.57■■□□□ 1.36
SPCS3-203ENST00000507678 MYH9P35579 1960 aaKnown RBP23.57■■□□□ 1.36
SPCS3-203ENST00000507678 SCP2P22307 547 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 MAGEA9P43362 315 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 C1orf54Q8WWF1 131 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 CD101Q93033 1021 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 MYCBPQ99417 103 aaPredicted RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 GTF2H1P32780 548 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 LSP1P33241 339 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 GJC1P36383 396 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 RPL21P46778 160 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 MTMR3Q13615 1198 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 VGLL4Q14135 290 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 UBAP2Q5T6F2 1119 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 TMEM270Q6UE05 265 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 CYFIP2Q96F07 1278 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 R3HDMLQ9H3Y0 253 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 KIAA0391O15091 583 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 ERLIN2O94905 339 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 RARAP10276 462 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 TMOD1P28289 359 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 NF2P35240 595 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 RWDD2BP57060 319 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 DHX34Q14147 1143 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 LRIG3Q6UXM1 1119 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 ZBTB33Q86T24 672 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 SLC13A5Q86YT5 568 aaPredicted RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 PSPC1Q8WXF1 523 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 PPANQ9NQ55 473 aaKnown RBP23.56■■□□□ 1.36
SPCS3-203ENST00000507678 GPRC5DQ9NZD1 345 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 BTBD7Q9P203 1132 aa23.56■■□□□ 1.36
SPCS3-203ENST00000507678 TLDC2A0PJX2 215 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 TTLL13PA6NNM8 815 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 SHBGP04278 402 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 UBA1P22314 1058 aaKnown RBP23.55■■□□□ 1.36
SPCS3-203ENST00000507678 GCNT1Q02742 428 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 GADL1Q6ZQY3 521 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 ZDHHC18Q9NUE0 388 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 PCDHB4Q9Y5E5 795 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 PCDHA3Q9Y5H8 950 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 UMODL1Q5DID0 1318 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 CHRNA3P32297 505 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 PTGIRP43119 386 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 CRELD2Q6UXH1 353 aaPredicted RBP23.55■■□□□ 1.36
SPCS3-203ENST00000507678 CCDC25Q86WR0 208 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 C11orf70Q9BRQ4 267 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 PORCNQ9H237 461 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 UVRAGQ9P2Y5 699 aa23.55■■□□□ 1.36
SPCS3-203ENST00000507678 EBAG9O00559 213 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 ATP2A1O14983 1001 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 VNN1O95497 513 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 SSR1P43307 286 aaKnown RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 ALDH5A1P51649 535 aaPredicted RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 ZACNQ401N2 412 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 OR5B17Q8NGF7 314 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 ATG4AQ8WYN0 398 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 TCHPQ9BT92 498 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 APOBEC3GQ9HC16 384 aaKnown RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 MTUS1Q9ULD2 1270 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 MAFBQ9Y5Q3 323 aaPredicted RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 FAM187AA6NFU0 413 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 GJB6O95452 261 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 NSFP46459 744 aaKnown RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 RTP1P59025 263 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 MAGOHP61326 146 aaKnown RBP23.54■■□□□ 1.36
SPCS3-203ENST00000507678 PPP2R5EQ16537 467 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 LY6KQ17RY6 165 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 ZDHHC24Q6UX98 284 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 FAM118BQ9BPY3 351 aa23.54■■□□□ 1.36
SPCS3-203ENST00000507678 SSC5DA1L4H1 1573 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 USP2O75604 605 aaPredicted RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 MTA2O94776 668 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 C4BPAP04003 597 aaKnown RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 CTNNA2P26232 953 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 PSMD6Q15008 389 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 TRIM50Q86XT4 487 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 MCOLN2Q8IZK6 566 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 DHX33Q9H6R0 707 aaKnown RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 ARID2Q68CP9 1835 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 ZNFX1Q9P2E3 1918 aaKnown RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 MDH1P40925 334 aaKnown RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 PSEN1P49768 467 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 TRIP13Q15645 432 aaPredicted RBP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 RUFY4Q6ZNE9 571 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 C15orf39Q6ZRI6 1047 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.53■■□□□ 1.36
SPCS3-203ENST00000507678 USTQ9Y2C2 406 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 PCDHB2Q9Y5E7 798 aa23.53■■□□□ 1.36
SPCS3-203ENST00000507678 H0YCG3 227 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 O00370 1275 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 STAM2O75886 525 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 SRGAP2CP0DJJ0 459 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 FGFR4P22455 802 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 COILP38432 576 aaPredicted RBP23.52■■□□□ 1.36
SPCS3-203ENST00000507678 PMS2P54278 862 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 PPP1R7Q15435 360 aa23.52■■□□□ 1.36
SPCS3-203ENST00000507678 HEMGNQ9BXL5 484 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms