RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 PLEKHG4Q58EX7 1191 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 CCDC62Q6P9F0 684 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 DHX37Q8IY37 1157 aaKnown RBP7.81□□□□□ -1.16
NR1I3-224ENST00000507215 MYOCDQ8IZQ8 938 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 FLCNQ8NFG4 579 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 PIWIL2Q8TC59 973 aaKnown RBP7.81□□□□□ -1.16
NR1I3-224ENST00000507215 AFG1LQ8WV93 481 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 UBE2FQ969M7 185 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 TOP1MTQ969P6 601 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 ANAPC16Q96DE5 110 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 TTC14Q96N46 770 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 C17orf80Q9BSJ5 609 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
NR1I3-224ENST00000507215 ZBTB40Q9NUA8 1239 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 TCP11L1Q9NUJ3 509 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 MAP3K20Q9NYL2 800 aaKnown RBP7.81□□□□□ -1.16
NR1I3-224ENST00000507215 ZSWIM5Q9P217 1185 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 ANAPC4Q9UJX5 808 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 PTPRZ1P23471 2315 aaPredicted RBP7.81□□□□□ -1.16
NR1I3-224ENST00000507215 USP34Q70CQ2 3546 aa7.81□□□□□ -1.16
NR1I3-224ENST00000507215 ABCB11O95342 1321 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TTC41PQ6P2S7 1318 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 CFAP54Q96N23 3096 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 CACNA1AO00555 2505 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 RSPH10B2B2RC85 870 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 HAS3O00219 553 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 CLEC3AO75596 197 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 EIF3JO75822 258 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 RPLP2P05387 115 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 RSPH10BP0C881 870 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TGFB3P10600 412 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 GNAT1P11488 350 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 GP2P55259 537 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 ARHGAP1Q07960 439 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 GNL2Q13823 731 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TCEAL5Q5H9L2 206 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TMEM63BQ5T3F8 832 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TDRD10Q5VZ19 366 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 SLC30A10Q6XR72 485 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 SERINC5Q86VE9 423 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 SAMD3Q8N6K7 520 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 KAT2BQ92831 832 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 CTAGE1Q96RT6 745 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 CLDND1Q9NY35 253 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 HDAC6Q9UBN7 1215 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TECTAO75443 2155 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
NR1I3-224ENST00000507215 TMEM221A6NGB7 291 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 M0R296 226 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 STXBP3O00186 592 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 SHOXO15266 292 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 MBTPS2O43462 519 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 RANBP6O60518 1105 aaKnown RBP7.79□□□□□ -1.16
NR1I3-224ENST00000507215 EYA4O95677 639 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 PTGS1P23219 599 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 CHMP4BP1P59074 171 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 TRAF1Q13077 416 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 KIAA0753Q2KHM9 967 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 TRIM71Q2Q1W2 868 aaKnown RBP7.79□□□□□ -1.16
NR1I3-224ENST00000507215 CCDC178Q5BJE1 867 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 XP32Q5T750 250 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 ZNF618Q5T7W0 954 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 EP400NLQ6ZTU2 488 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 RPAINQ86UA6 219 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 ABI1Q8IZP0 508 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 FIBCD1Q8N539 461 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 DBF4BQ8NFT6 615 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 IL17RAQ96F46 866 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 GPR62Q9BZJ7 368 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 IL17RBQ9NRM6 502 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 FAM86C1Q9NVL1 165 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 CD207Q9UJ71 328 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 ADAMTS6Q9UKP5 1117 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 SPTBN4Q9H254 2564 aa7.79□□□□□ -1.16
NR1I3-224ENST00000507215 RIF1Q5UIP0 2472 aaKnown RBP7.78□□□□□ -1.16
NR1I3-224ENST00000507215 ZFHX2Q9C0A1 2572 aaPredicted RBP7.78□□□□□ -1.16
NR1I3-224ENST00000507215 PROB1E7EW31 1015 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 SMAD7O15105 426 aaKnown RBP7.78□□□□□ -1.16
NR1I3-224ENST00000507215 ARIH2O95376 493 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 ESR1P03372 595 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 SNHG28P0DPA3 235 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 PDHBP11177 359 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 BMPR1AP36894 532 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 THPOP40225 353 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 PMS1P54277 932 aaKnown RBP7.78□□□□□ -1.16
NR1I3-224ENST00000507215 ZNF543Q08ER8 600 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 ALX1Q15699 326 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 GAB4Q2WGN9 574 aa7.78□□□□□ -1.16
NR1I3-224ENST00000507215 AXDND1Q5T1B0 1012 aaPredicted RBP7.78□□□□□ -1.16
NR1I3-224ENST00000507215 SEPT14Q6ZU15 432 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms