RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CAPSQ13938 189 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 GRM2Q14416 872 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 NTRK3Q16288 839 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 PABPC1LQ4VXU2 614 aaKnown RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 SLC27A1Q6PCB7 646 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 B3GNT9Q6UX72 402 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 EXOC8Q8IYI6 725 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 RNF168Q8IYW5 571 aaPredicted RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 ASAP3Q8TDY4 903 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 CLSTN3Q9BQT9 956 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 TTPALQ9BTX7 342 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 PLA2G2FQ9BZM2 168 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 PARD6AQ9NPB6 346 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 SH3GLB2Q9NR46 395 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 ZSCAN32Q9NX65 697 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 FBXW11Q9UKB1 542 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 VAV3Q9UKW4 847 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 USP20Q9Y2K6 914 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 GIT1Q9Y2X7 761 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 MRPS23Q9Y3D9 190 aaKnown RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 PCDHGA2Q9Y5H1 932 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 SNX14Q9Y5W7 946 aa6.39□□□□□ -1.39
GYPB-208ENST00000507009 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 ZFP37Q9Y6Q3 630 aaPredicted RBP6.39□□□□□ -1.39
GYPB-208ENST00000507009 CEP250Q9BV73 2442 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CYP3A7-CYP3A51PA0A087WV96 503 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 PRR5-ARHGAP8B1AHC4 643 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 I3L4J1 428 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 NCAM2O15394 837 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 USO1O60763 962 aaKnown RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 CDC45O75419 566 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 BAG4O95429 457 aaKnown RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 HNRNPA1P09651 372 aaKnown RBP eCLIP6.38□□□□□ -1.39
GYPB-208ENST00000507009 CEBPBP17676 345 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CYP3A7P24462 503 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 PTENP60484 403 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 ARHGAP8P85298 464 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 MBTD1Q05BQ5 628 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 MTAPQ13126 283 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 PPP2R5CQ13362 524 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 TUSC3Q13454 348 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 MXD4Q14582 209 aaPredicted RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 EPHA7Q15375 998 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 ZNF528Q3MIS6 628 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 PPM1JQ5JR12 505 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 ZNF852Q6ZMS4 543 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 PIK3AP1Q6ZUJ8 805 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 NEK8Q86SG6 692 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 NPAS3Q8IXF0 933 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 GPR161Q8N6U8 529 aaKnown RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 PIGOQ8TEQ8 1089 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CCDC51Q96ER9 411 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 FAM20AQ96MK3 541 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 MBOAT7Q96N66 472 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 RHOBTB2Q9BYZ6 727 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 POLR3FQ9H1D9 316 aaPredicted RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 CXCL16Q9H2A7 254 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 ZSWIM4Q9H7M6 989 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 XPNPEP1Q9NQW7 623 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 GJB4Q9NTQ9 266 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 SNTG2Q9NY99 539 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 DNMT3BQ9UBC3 853 aaKnown RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
GYPB-208ENST00000507009 GDAQ9Y2T3 454 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 CACNA1BQ00975 2339 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 OTOGLQ3ZCN5 2332 aa6.38□□□□□ -1.39
GYPB-208ENST00000507009 VWA8A3KMH1 1905 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 TICRRQ7Z2Z1 1910 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 NID2Q14112 1375 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 PRRG1O14668 218 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 TBX3O15119 743 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 TBC1D4O60343 1298 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 DEXIO95424 95 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 EFEMP2O95967 443 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 LRG1P02750 347 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 THP07101 528 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 RHOP08100 348 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 GLRA2P23416 452 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 IGFBP6P24592 240 aaPredicted RBP6.37□□□□□ -1.39
GYPB-208ENST00000507009 ELF1P32519 619 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 SRSF5Q13243 272 aaKnown RBP6.37□□□□□ -1.39
GYPB-208ENST00000507009 AMHR2Q16671 573 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 SLC5A9Q2M3M2 681 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 BMP2KLQ5H9B9 411 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 GLRA4Q5JXX5 417 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 HEATR6Q6AI08 1181 aaKnown RBP6.37□□□□□ -1.39
GYPB-208ENST00000507009 TANGO2Q6ICL3 276 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 PPP4R3AQ6IN85 833 aa6.37□□□□□ -1.39
GYPB-208ENST00000507009 CPLX2Q6PUV4 134 aaKnown RBP6.37□□□□□ -1.39
GYPB-208ENST00000507009 MOXD1Q6UVY6 613 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms