RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SNX21Q969T3 373 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 UROC1Q96N76 676 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 ZMAT2Q96NC0 199 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 FIZ1Q96SL8 496 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 CLSTN3Q9BQT9 956 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 TTPALQ9BTX7 342 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 HAPLN2Q9GZV7 340 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 CNTN3Q9P232 1028 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 DPP7Q9UHL4 492 aa9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 SRPRBQ9Y5M8 271 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-209ENST00000506632 PDCD11Q14690 1871 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 TGM5O43548 720 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 FGFR3P22607 806 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 SP100P23497 879 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 MARCKSP29966 332 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 CLCNKBP51801 687 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 YARSP54577 528 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 OSTNP61366 133 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 STRN3Q13033 797 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 SLC10A6Q3KNW5 377 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 FAM171A1Q5VUB5 890 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 DCLRE1AQ6PJP8 1040 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 PRSS55Q6UWB4 352 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 HFE2Q6ZVN8 426 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 HAUS6Q7Z4H7 955 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 LARP4BQ92615 738 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 EPSTI1Q96J88 318 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 ACAP3Q96P50 834 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 PLEKHA4Q9H4M7 779 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 PARVGQ9HBI0 331 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 GOLGA2P5Q9HBQ8 144 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 SLC38A7Q9NVC3 462 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 MYO10Q9HD67 2058 aa9.93□□□□□ -0.82
PDLIM5-209ENST00000506632 CCDC195A0A1B0GUA6 201 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ADAM12O43184 909 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 STX6O43752 255 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 FAM189A1O60320 539 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 RFPL2O75678 378 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 B3GAT3O94766 335 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 FAM13AO94988 1023 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 DDIT3P35638 169 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 NASPP49321 788 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 SIGLEC14Q08ET2 396 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 DHX8Q14562 1220 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 SLC39A14Q15043 492 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 PSMD5Q16401 504 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 SPECC1Q5M775 1068 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 SLC39A4Q6P5W5 647 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 PDXDC1Q6P996 788 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ELMSAN1Q6PJG2 1045 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 TDRD5Q8NAT2 981 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ASIC4Q96FT7 647 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 DDX27Q96GQ7 796 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 CLIC6Q96NY7 704 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 TCHPQ9BT92 498 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ST6GALNAC4Q9H4F1 302 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ZSCAN16Q9H4T2 348 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 MTRRQ9UBK8 725 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 STK17AQ9UEE5 414 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 FBXW11Q9UKB1 542 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 TBX20Q9UMR3 447 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 SORCS3Q9UPU3 1222 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 HCN4Q9Y3Q4 1203 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 DOCK8Q8NF50 2099 aa9.92□□□□□ -0.82
PDLIM5-209ENST00000506632 TRIOO75962 3097 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 CLUHO75153 1309 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 TTC26A0AVF1 554 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 TMEM221A6NGB7 291 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 K7ENM7 598 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 M0R296 226 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 PODXLO00592 558 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 CLDN3O15551 220 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 TRAK2O60296 914 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 ZMYND10O75800 440 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 ADRB2P07550 413 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 HARSP12081 509 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 RPL9P32969 192 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 BRCC3P46736 316 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 GTF2BQ00403 316 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 RAB33AQ14088 237 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 SEZ6Q53EL9 994 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 OTOP3Q7RTS5 596 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 MAP4K3Q8IVH8 894 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 GLYCTKQ8IVS8 523 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 KREMEN2Q8NCW0 462 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms