RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 IDEP14735 1019 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 MTHFRP42898 656 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 PLXNA3P51805 1871 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 PKP1Q13835 747 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 PDCD11Q14690 1871 aaKnown RBP17■□□□□ 0.31
CLDND1-211ENST00000506575 PDXDC1Q6P996 788 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 SFR1Q86XK3 245 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 MAP4K3Q8IVH8 894 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 GLYCTKQ8IVS8 523 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.31
CLDND1-211ENST00000506575 FIZ1Q96SL8 496 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 LRRC27Q9C0I9 530 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 EPHX3Q9H6B9 360 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
CLDND1-211ENST00000506575 FNIP2Q9P278 1114 aa17■□□□□ 0.31
CLDND1-211ENST00000506575 LOC730098B7Z3J9 87 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 CXCL8P10145 99 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 ME1P48163 572 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 UPP1Q16831 310 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 SLC10A6Q3KNW5 377 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 ZC2HC1CQ53FD0 456 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-211ENST00000506575 RTP2Q5QGT7 225 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 ATAT1Q5SQI0 421 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PRSS55Q6UWB4 352 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-211ENST00000506575 TMC5Q6UXY8 1006 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PALB2Q86YC2 1186 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
CLDND1-211ENST00000506575 MSTO1Q9BUK6 570 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 PLEKHA5Q9HAU0 1116 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
CLDND1-211ENST00000506575 MTCL1Q9Y4B5 1905 aaKnown RBP16.98■□□□□ 0.31
CLDND1-211ENST00000506575 PODXLO00592 558 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 OGTO15294 1046 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 DCXO43602 365 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 WEE2P0C1S8 567 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 RPL17P18621 184 aaKnown RBP16.98■□□□□ 0.31
CLDND1-211ENST00000506575 PPP2R3AQ06190 1150 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-211ENST00000506575 PSMD5Q16401 504 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 HERC4Q5GLZ8 1057 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-211ENST00000506575 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 RNF135Q8IUD6 432 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 IQUBQ8NA54 791 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 RPF1Q9H9Y2 349 aaKnown RBP16.98■□□□□ 0.31
CLDND1-211ENST00000506575 TSHZ2Q9NRE2 1034 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 TBC1D7Q9P0N9 293 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 CDH22Q9UJ99 828 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 NR2E1Q9Y466 385 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 VWA8A3KMH1 1905 aa16.98■□□□□ 0.31
CLDND1-211ENST00000506575 A0A0B4J269 797 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 C1RP00736 705 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 SPATA31D3P0C874 917 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
CLDND1-211ENST00000506575 TNFSF9P41273 254 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 AMPD3Q01432 767 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
CLDND1-211ENST00000506575 SLFN12LQ6IEE8 588 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 SHC4Q6S5L8 630 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 SPATA31D4Q6ZUB0 917 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 LNX1Q8TBB1 728 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-211ENST00000506575 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 C18orf25Q96B23 403 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-211ENST00000506575 DHX58Q96C10 678 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 PLEKHA4Q9H4M7 779 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 POMKQ9H5K3 350 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 EXOC7Q9UPT5 735 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 PCDHB13Q9Y5F0 798 aa16.97■□□□□ 0.31
CLDND1-211ENST00000506575 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
CLDND1-211ENST00000506575 TTC26A0AVF1 554 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-211ENST00000506575 TGM5O43548 720 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 XPOTO43592 962 aaKnown RBP16.96■□□□□ 0.31
CLDND1-211ENST00000506575 GCNT3O95395 438 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 MYBP10242 640 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 FGFR3P22607 806 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 SP100P23497 879 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-211ENST00000506575 BRCC3P46736 316 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 BECN1Q14457 450 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 E2F4Q16254 413 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 TMEM31Q5JXX7 168 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 ADALQ6DHV7 355 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
CLDND1-211ENST00000506575 GPR149Q86SP6 731 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms