RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 COLEC11Q9BWP8 271 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 CDT1Q9H211 546 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 TMEM206Q9H813 350 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
GYPB-206ENST00000506516 OLFML3Q9NRN5 406 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 MIOSQ9NXC5 875 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 TBC1D7Q9P0N9 293 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 ANKFY1Q9P2R3 1169 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 LZTS1Q9Y250 596 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 HPSEQ9Y251 543 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 GDAQ9Y2T3 454 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 ZMYM2Q9UBW7 1377 aa7.94□□□□□ -1.14
GYPB-206ENST00000506516 NT5C1B-RDH14C9J2C7 533 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 NRP1O14786 923 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 NCK2O43639 380 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 RECQL4O94761 1208 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 DDHD2O94830 711 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 ZNF202O95125 648 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 PIGRP01833 764 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 ITGB1P05556 798 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 HARSP12081 509 aaKnown RBP7.93□□□□□ -1.14
GYPB-206ENST00000506516 OR1G1P47890 313 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 OSTNP61366 133 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 GRIK3Q13003 919 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 COASYQ13057 564 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 PSMD2Q13200 908 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 CUL4BQ13620 913 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 TIGD5Q53EQ6 642 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
GYPB-206ENST00000506516 UNC13DQ70J99 1090 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 TMC7Q7Z402 723 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 ZNF280BQ86YH2 543 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 MAP4K3Q8IVH8 894 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 SLC39A11Q8N1S5 342 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 GSTCDQ8NEC7 633 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 IGSF21Q96ID5 467 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 SPSB2Q99619 263 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 MSTO1Q9BUK6 570 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 STRA6Q9BX79 667 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 BLZF1Q9H2G9 400 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 NSUN3Q9H649 340 aaKnown RBP7.93□□□□□ -1.14
GYPB-206ENST00000506516 PLEKHA5Q9HAU0 1116 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 PRM3Q9NNZ6 103 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 NGRNQ9NPE2 291 aaKnown RBP7.93□□□□□ -1.14
GYPB-206ENST00000506516 DNAJB4Q9UDY4 337 aa7.93□□□□□ -1.14
GYPB-206ENST00000506516 HOOK1Q9UJC3 728 aaKnown RBP7.93□□□□□ -1.14
GYPB-206ENST00000506516 PTPRSQ13332 1948 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 A0A0B4J269 797 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 ABLIM1O14639 778 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 OGTO15294 1046 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 TADA2AO75478 443 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 LDHAP00338 332 aaKnown RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 CLTAP09496 248 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 MYBP10242 640 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 PBX3P40426 434 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 SLC11A1P49279 550 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 POU5F1Q01860 360 aaKnown RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 TUSC3Q13454 348 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 FAM26FQ5R3K3 315 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 ALKAL1Q6UXT8 129 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 KRBA2Q6ZNG9 492 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 DDX53Q86TM3 631 aaKnown RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 CD302Q8IX05 232 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 COLGALT2Q8IYK4 626 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 TMEM87AQ8NBN3 555 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 ZNF507Q8TCN5 953 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 POMGNT1Q8WZA1 660 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 UROC1Q96N76 676 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 IPO9Q96P70 1041 aaKnown RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 TLR9Q9NR96 1032 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 SLC38A7Q9NVC3 462 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 AGO2Q9UKV8 859 aaKnown RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 SSX2IPQ9Y2D8 614 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.92□□□□□ -1.14
GYPB-206ENST00000506516 CHD7Q9P2D1 2997 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 GBF1Q92538 1859 aa7.92□□□□□ -1.14
GYPB-206ENST00000506516 SMIM28A0A1B0GU29 152 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 FSD2A1L4K1 749 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 ANKRD63C9JTQ0 380 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 PTGESO14684 152 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 KIAA0391O15091 583 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 EIF3DO15371 548 aaKnown RBP eCLIP7.91□□□□□ -1.14
GYPB-206ENST00000506516 XPOTO43592 962 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 PRPF6O94906 941 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 CSPG5O95196 566 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 KIF20AO95235 890 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 CXCL14O95715 111 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 RPN1P04843 607 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 KCNE1P15382 129 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 JUNDP17535 347 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 GARTP22102 1010 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 DNAJB1P25685 340 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 CASP1P29466 404 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 CA8P35219 290 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 SNRPFP62306 86 aaKnown RBP7.91□□□□□ -1.14
GYPB-206ENST00000506516 FAM160A1Q05DH4 1040 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 DSC1Q08554 894 aa7.91□□□□□ -1.14
GYPB-206ENST00000506516 CAMK1Q14012 370 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms