RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CXCL16Q9H2A7 254 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 PXMP2Q9NR77 195 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 KCNH7Q9NS40 1196 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 LRWD1Q9UFC0 647 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 TSR3Q9UJK0 312 aaKnown RBP6.46□□□□□ -1.37
SCLT1-207ENST00000506233 CAPN6Q9Y6Q1 641 aa6.46□□□□□ -1.37
SCLT1-207ENST00000506233 PTPRDP23468 1912 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 IQCF3P0C7M6 154 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SELPP16109 830 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 TARBP2Q15633 366 aaKnown RBP6.46□□□□□ -1.38
SCLT1-207ENST00000506233 STK35Q8TDR2 534 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 DYDC2Q96IM9 177 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 CLMNQ96JQ2 1002 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SLC6A16Q9GZN6 736 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 TAOK3Q9H2K8 898 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 CYP39A1Q9NYL5 469 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SMTNL1A8MU46 457 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 KPNA6O60684 536 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 MYBL2P10244 700 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 ACTN1P12814 892 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 GCFC2P16383 781 aaKnown RBP6.46□□□□□ -1.38
SCLT1-207ENST00000506233 RPS12P25398 132 aaKnown RBP6.46□□□□□ -1.38
SCLT1-207ENST00000506233 NCKAP1LP55160 1127 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SOX10P56693 466 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 BACE1P56817 501 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCLT1-207ENST00000506233 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 BTLAQ7Z6A9 289 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 LRRC57Q8N9N7 239 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SUPT20HQ8NEM7 779 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 SMCR8Q8TEV9 937 aaPredicted RBP6.46□□□□□ -1.38
SCLT1-207ENST00000506233 ATG4CQ96DT6 458 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 LRGUKQ96M69 825 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 TUBGCP2Q9BSJ2 902 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF341Q9BYN7 854 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 TMEM59LQ9UK28 342 aa6.46□□□□□ -1.38
SCLT1-207ENST00000506233 PMM2O15305 246 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PJA2O43164 708 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 XYLBO75191 536 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 RPLP1P05386 114 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 EEF1GP26641 437 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 MAN1A1P33908 653 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PLA2G4AP47712 749 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 GEMIN4P57678 1058 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 RPS6P62753 249 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 VGLL4Q14135 290 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 MPP2Q14168 576 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CTTNQ14247 550 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ODF1Q14990 250 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 VWA3BQ502W6 1294 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ICE2Q659A1 982 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 GJB7Q6PEY0 223 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ILDR2Q71H61 639 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 EEPD1Q7L9B9 569 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 NIPA1Q7RTP0 329 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 VSIG10LQ86VR7 867 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CREG2Q8IUH2 290 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PIGOQ8TEQ8 1089 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 DDX1Q92499 740 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 LIN7BQ9HAP6 207 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 TRIM39Q9HCM9 518 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PLCB1Q9NQ66 1216 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 JADE2Q9NQC1 790 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 HDAC6Q9UBN7 1215 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 FEM1BQ9UK73 627 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ZHX2Q9Y6X8 837 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 A0A0G2JLL6 359 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 A6NNZ2 444 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ADM5C9JUS6 153 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 SUSD5O60279 629 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CTGFP29279 349 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ETF1P62495 437 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PRR16Q569H4 304 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 C1QTNF12Q5T7M4 302 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 COL13A1Q5TAT6 717 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PAPD7Q5XG87 772 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ABHD15Q6UXT9 468 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 NLRP8Q86W28 1048 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 LNX1Q8TBB1 728 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 FBXL18Q96ME1 805 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 BAG1Q99933 345 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PCDHA12Q9UN75 941 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PCDHA3Q9Y5H8 950 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 EVPLQ92817 2033 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PTPRSQ13332 1948 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 TBX1O43435 398 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PNMA6AP0CW24 399 aaPredicted RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PON1P27169 355 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 NMT1P30419 496 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 RARRES1P49788 294 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 RENBPP51606 427 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms