RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PSMA7O14818 248 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 CLIC2O15247 247 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 OGTO15294 1046 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 TGFB1I1O43294 461 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 MBTPS2O43462 519 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 CALUO43852 315 aaPredicted RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 EOMESO95936 686 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 ATF7P17544 494 aaPredicted RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 BMP6P22004 513 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 GRM5P41594 1212 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 OSTNP61366 133 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 ACAP1Q15027 740 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 ST3GAL2Q16842 350 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 KLHL10Q6JEL2 608 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 TMCO2Q7Z6W1 182 aaPredicted RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 MRPL10Q7Z7H8 261 aaKnown RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 ABI1Q8IZP0 508 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 NOC3LQ8WTT2 800 aaKnown RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 ZBED2Q9BTP6 218 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 CCDC94Q9BW85 323 aaPredicted RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 HAPLN2Q9GZV7 340 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 KCTD10Q9H3F6 313 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 AGPAT3Q9NRZ7 376 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 SNTG2Q9NY99 539 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 CGNQ9P2M7 1197 aaKnown RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 PARP2Q9UGN5 583 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 AGO2Q9UKV8 859 aaKnown RBP10.93□□□□□ -0.66
NUP54-203ENST00000504173 MTUS1Q9ULD2 1270 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 HES2Q9Y543 173 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 STYXL1Q9Y6J8 313 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 PTPRSQ13332 1948 aa10.93□□□□□ -0.66
NUP54-203ENST00000504173 LOC730098B7Z3J9 87 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 PDXKO00764 312 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 KIAA0391O15091 583 aaKnown RBP10.92□□□□□ -0.66
NUP54-203ENST00000504173 HOXA2O43364 376 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 RECQL4O94761 1208 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 GJB5O95377 273 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 FGFR1P11362 822 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 GARTP22102 1010 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 AKAP5P24588 427 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 ADSSP30520 456 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
NUP54-203ENST00000504173 NLRP12P59046 1061 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
NUP54-203ENST00000504173 CBX2Q14781 532 aaPredicted RBP10.92□□□□□ -0.66
NUP54-203ENST00000504173 KYAT1Q16773 422 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 SEZ6Q53EL9 994 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 GLB1LQ6UWU2 654 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 AGMOQ6ZNB7 445 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 CEP120Q8N960 986 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 MLKLQ8NB16 471 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 DHTKD1Q96HY7 919 aaPredicted RBP10.92□□□□□ -0.66
NUP54-203ENST00000504173 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 YME1L1Q96TA2 773 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 TSG101Q99816 390 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 PCIF1Q9H4Z3 704 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 RSAD1Q9HA92 442 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 GPR179Q6PRD1 2367 aa10.92□□□□□ -0.66
NUP54-203ENST00000504173 FRYLO94915 3013 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 GOLGA8IPA6NC78 632 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 GOLGA8JA6NMD2 632 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 TBKBP1A7MCY6 615 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 EXTL3O43909 919 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 LETM1O95202 739 aaPredicted RBP10.91□□□□□ -0.66
NUP54-203ENST00000504173 LDHAP00338 332 aaKnown RBP10.91□□□□□ -0.66
NUP54-203ENST00000504173 NR3C1P04150 777 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 CLTAP09496 248 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 CD44P16070 742 aaKnown RBP10.91□□□□□ -0.66
NUP54-203ENST00000504173 CCNE1P24864 410 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 ACOT2P49753 483 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 GATMP50440 423 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 CYP2J2P51589 502 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 PAK1Q13153 545 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 DPCR1Q3MIW9 517 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 ZBTB41Q5SVQ8 909 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 FRMD5Q7Z6J6 570 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 TMEM192Q8IY95 271 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 CRIPAKQ8N1N5 446 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 GPD1LQ8N335 351 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 URGCPQ8TCY9 931 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 HELQQ8TDG4 1101 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 NELFBQ8WX92 580 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 P2RX5Q93086 422 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
NUP54-203ENST00000504173 RPS6KC1Q96S38 1066 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms