RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
COPS4-202ENST00000503682 PPFIBP1Q86W92 1011 aa11.16□□□□□ -0.62
COPS4-202ENST00000503682 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
COPS4-202ENST00000503682 C18orf25Q96B23 403 aaPredicted RBP11.16□□□□□ -0.62
COPS4-202ENST00000503682 ACAP3Q96P50 834 aa11.16□□□□□ -0.62
COPS4-202ENST00000503682 TIPINQ9BVW5 301 aa11.16□□□□□ -0.62
COPS4-202ENST00000503682 DZANK1Q9NVP4 752 aa11.16□□□□□ -0.62
COPS4-202ENST00000503682 SRPRBQ9Y5M8 271 aaKnown RBP11.16□□□□□ -0.62
COPS4-202ENST00000503682 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 A0A087X0B3 334 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 TISP43B9A030 160 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 K7ENM7 598 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 TGM5O43548 720 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 B3GAT3O94766 335 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 GLUD1P00367 558 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 ASGR2P07307 311 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 ADH1AP07327 375 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 TNFSF9P41273 254 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 SMTNP53814 917 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
COPS4-202ENST00000503682 SLC10A6Q3KNW5 377 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 ZC2HC1CQ53FD0 456 aaPredicted RBP11.15□□□□□ -0.62
COPS4-202ENST00000503682 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 GPR149Q86SP6 731 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 ST13P5Q8NFI4 369 aaPredicted RBP11.15□□□□□ -0.62
COPS4-202ENST00000503682 LNX1Q8TBB1 728 aaPredicted RBP11.15□□□□□ -0.62
COPS4-202ENST00000503682 BICD1Q96G01 975 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 SNX27Q96L92 541 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 CCSER1Q9C0I3 900 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 SFXN1Q9H9B4 322 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 LARSQ9P2J5 1176 aaKnown RBP11.15□□□□□ -0.62
COPS4-202ENST00000503682 SF3B1O75533 1304 aaKnown RBP eCLIP11.15□□□□□ -0.62
COPS4-202ENST00000503682 ZMYM2Q9UBW7 1377 aa11.15□□□□□ -0.62
COPS4-202ENST00000503682 CXCL8P10145 99 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 MCF2P10911 925 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 DDIT3P35638 169 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 MTHFRP42898 656 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 NOLC1Q14978 699 aaKnown RBP eCLIP11.15□□□□□ -0.63
COPS4-202ENST00000503682 UPP1Q16831 310 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 RSPO2Q6UXX9 243 aaPredicted RBP11.15□□□□□ -0.63
COPS4-202ENST00000503682 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 STAMQ92783 540 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 EDAQ92838 391 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 SNX21Q969T3 373 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 FIZ1Q96SL8 496 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 CLSTN3Q9BQT9 956 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 TTPALQ9BTX7 342 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 PARVGQ9HBI0 331 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 KCND2Q9NZV8 630 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 ODF2LQ9ULJ1 636 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 SSX2IPQ9Y2D8 614 aa11.15□□□□□ -0.63
COPS4-202ENST00000503682 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 CLDN3O15551 220 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TRAK2O60296 914 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TOM1L1O75674 476 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TKTP29401 623 aaKnown RBP11.14□□□□□ -0.63
COPS4-202ENST00000503682 GUCY2FP51841 1108 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 ZXDAP98168 799 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 PKP1Q13835 747 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 PSMD5Q16401 504 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 LILRA6Q6PI73 481 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 PDILTQ8N807 584 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 STK39Q9UEW8 545 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 LIMD1Q9UGP4 676 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 TBX20Q9UMR3 447 aa11.14□□□□□ -0.63
COPS4-202ENST00000503682 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 MYMKA6NI61 221 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 BRD1O95696 1058 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 LIG4P49917 911 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 ZNF131P52739 623 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 SLC39A14Q15043 492 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 STK38Q15208 465 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 DCLRE1AQ6PJP8 1040 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
COPS4-202ENST00000503682 SFR1Q86XK3 245 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 KREMEN2Q8NCW0 462 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
COPS4-202ENST00000503682 NECTIN4Q96NY8 510 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 TOPORSQ9NS56 1045 aaPredicted RBP11.13□□□□□ -0.63
COPS4-202ENST00000503682 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
COPS4-202ENST00000503682 CCDC39Q9UFE4 941 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 NR2E1Q9Y466 385 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 TCHHQ07283 1943 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 SCN1AP35498 2009 aa11.13□□□□□ -0.63
COPS4-202ENST00000503682 PODXLO00592 558 aa11.12□□□□□ -0.63
COPS4-202ENST00000503682 HNRNPDLO14979 420 aaKnown RBP11.12□□□□□ -0.63
COPS4-202ENST00000503682 SLC26A4O43511 780 aa11.12□□□□□ -0.63
COPS4-202ENST00000503682 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms