RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 TISP43B9A030 160 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 TULP1O00294 542 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-218ENST00000498136 MBTPS2O43462 519 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 B3GAT3O94766 335 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 PFKFB1P16118 471 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 CASP5P51878 434 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 SMAD4Q13485 552 aaKnown RBP18.21■□□□□ 0.51
ABCF3-218ENST00000498136 ALCAMQ13740 583 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 SLC10A6Q3KNW5 377 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 CEP57Q86XR8 500 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 KLHL5Q96PQ7 755 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 APOL5Q9BWW9 433 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
ABCF3-218ENST00000498136 A0A0B4J269 797 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 PPP1R37O75864 691 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 CNPP09543 421 aaKnown RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 KCNE1P15382 129 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 CMA1P23946 247 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 CASP1P29466 404 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 DSG1Q02413 1049 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 SOX4Q06945 474 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 SPAG1Q07617 926 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 KCNA1Q09470 495 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 ZBTB41Q5SVQ8 909 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 FAM171A1Q5VUB5 890 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 DCLRE1AQ6PJP8 1040 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 PPFIBP1Q86W92 1011 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 RNF168Q8IYW5 571 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 SMRP1Q8NCR6 262 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 C18orf25Q96B23 403 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 DDX27Q96GQ7 796 aaKnown RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 C7orf25Q9BPX7 421 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 FGFBP2Q9BYJ0 223 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 IKZF4Q9H2S9 585 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
ABCF3-218ENST00000498136 AGO2Q9UKV8 859 aaKnown RBP18.2■□□□□ 0.5
ABCF3-218ENST00000498136 PODXLO00592 558 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 PRPF6O94906 941 aaKnown RBP18.19■□□□□ 0.5
ABCF3-218ENST00000498136 ADH1AP07327 375 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 EPCAMP16422 314 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 ACOT2P49753 483 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 ELAVL2Q12926 359 aaKnown RBP18.19■□□□□ 0.5
ABCF3-218ENST00000498136 KCNC3Q14003 757 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 POSTNQ15063 836 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 UPP1Q16831 310 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 TMEM184AQ6ZMB5 413 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 GLYCTKQ8IVS8 523 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
ABCF3-218ENST00000498136 HPS3Q969F9 1004 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 STRA6Q9BX79 667 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 CHST7Q9NS84 486 aa18.19■□□□□ 0.5
ABCF3-218ENST00000498136 TTC26A0AVF1 554 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 LACTBL1A8MY62 500 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 TMEM189-UBE2V1I3L0A0 370 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 MEFVO15553 781 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 LILRB3O75022 631 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 EFEMP2O95967 443 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 HOXB8P17481 243 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 SYKP43405 635 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 CUL4BQ13620 913 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 SMAD2Q15796 467 aaKnown RBP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 FAM26FQ5R3K3 315 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 TMEM206Q9H813 350 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 TUBGCP4Q9UGJ1 667 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 USP25Q9UHP3 1055 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 CPSF3Q9UKF6 684 aaKnown RBP18.18■□□□□ 0.5
ABCF3-218ENST00000498136 NUB1Q9Y5A7 615 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
ABCF3-218ENST00000498136 GOLGA6L4A6NEF3 574 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 TNFRSF10AO00220 468 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 TEX28O15482 410 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
ABCF3-218ENST00000498136 ACTN4O43707 911 aaKnown RBP18.17■□□□□ 0.5
ABCF3-218ENST00000498136 FAM189A1O60320 539 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-218ENST00000498136 RPL9P32969 192 aaKnown RBP18.17■□□□□ 0.5
ABCF3-218ENST00000498136 BRCC3P46736 316 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 CLCN4P51793 760 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 NDUFA8P51970 172 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 CREMQ03060 361 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 PRSS55Q6UWB4 352 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-218ENST00000498136 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
ABCF3-218ENST00000498136 C3orf58Q8NDZ4 430 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms