RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 KIAA0753Q2KHM9 967 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 WDR78Q5VTH9 848 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LRRC8BQ6P9F7 803 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LVRNQ6Q4G3 990 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CD300LDQ6UXZ3 194 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NAPRTQ6XQN6 538 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC36A4Q6YBV0 504 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PIGWQ7Z7B1 504 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PROCA1Q8NCQ7 364 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 OR5M3Q8NGP4 307 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CLHC1Q8NHS4 586 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ENOX1Q8TC92 643 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 PCNPQ8WW12 178 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CTNNBL1Q8WYA6 563 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ATP6V1E2Q96A05 226 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DCAF5Q96JK2 942 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PWWP2AQ96N64 755 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC4A9Q96Q91 983 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 RAB11FIP5Q9BXF6 653 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 QRSL1Q9H0R6 528 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 FOXP1Q9H334 677 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC32A1Q9H598 525 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CAAP1Q9H8G2 361 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FN3KRPQ9HA64 309 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CYP4F12Q9HCS2 524 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MIEF1Q9NQG6 463 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 AKAP7Q9P0M2 348 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZSWIM5Q9P217 1185 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 STIM2Q9P246 746 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC22A14Q9Y267 594 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MAP3K2Q9Y2U5 619 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 USP54Q70EL1 1684 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TCAF2A6NFQ2 919 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ADCY3O60266 1144 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 UNC5CO95185 931 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SRGNP10124 158 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NDUFB7P17568 137 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DGKAP23743 735 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PTPN7P35236 360 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC6A9P48067 706 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MMP14P50281 582 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 POLGP54098 1239 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ADCY2Q08462 1091 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PTK7Q13308 1070 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NFIL3Q16649 462 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 IMMTQ16891 758 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ERCC6LQ2NKX8 1250 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZNF585BQ52M93 769 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZNF468Q5VIY5 522 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 SCYL2Q6P3W7 929 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CHST15Q7LFX5 561 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 UBE3BQ7Z3V4 1068 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FBXO11Q86XK2 927 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 VGLL2Q8N8G2 317 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 HAUS8Q9BT25 410 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NUP58Q9BVL2 599 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PLVAPQ9BX97 442 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TEX13BQ9BXU2 312 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 THAP9Q9H5L6 903 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CNNM1Q9NRU3 951 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLAMF8Q9P0V8 285 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PXDNQ92626 1479 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CNTRLQ7Z7A1 2325 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FMN2Q9NZ56 1722 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 A6NHS1 94 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SPECC1L-ADORA2AF8WAN1 911 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RNF103O00237 685 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 EI24O14681 340 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CBFA2T3O75081 653 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GAS8-AS1O95177 125 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CRYBA1P05813 215 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TMEM253P0C7T8 217 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PRKAR1AP10644 381 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RBP3P10745 1247 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PYGMP11217 842 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CHRNB1P11230 501 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ALAS1P13196 640 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GP1BBP13224 206 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PHKG2P15735 406 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ACADSP16219 412 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ATP6V1B2P21281 511 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CNR1P21554 472 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 VPS41P49754 854 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NEK4P51957 841 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TIMM10P62072 90 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 EXOSC9Q06265 439 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 LRMPQ12912 555 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MRPL28Q13084 256 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZNF266Q14584 549 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TMEM132BQ14DG7 1078 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MEA1Q16626 185 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZSCAN26Q16670 478 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ATP13A5Q4VNC0 1218 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 VWA2Q5GFL6 755 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FOXD4L5Q5VV16 416 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 GTF2IRD2BQ6EKJ0 949 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PODNL1Q6PEZ8 512 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CCDC81Q6ZN84 652 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NEK10Q6ZWH5 1172 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TIPARPQ7Z3E1 657 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms