RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PHACTR2O75167 634 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 DUSP11O75319 330 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 IL18RAPO95256 599 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 MOCS3O95396 460 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 IGHA2P01877 340 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 TNNC2P02585 160 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CXCL8P10145 99 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 MCF2P10911 925 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 FLT3LGP49771 235 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 AP3M2P53677 418 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 NOP14P78316 857 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CLDN10P78369 228 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 GCNT1Q02742 428 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 AMHR2Q16671 573 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 DEFB115Q30KQ5 88 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 MARCH8Q5T0T0 291 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 C10orf76Q5T2E6 689 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ENOSF1Q7L5Y1 443 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 APBB1IPQ7Z5R6 666 aaPredicted RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 SRGAP1Q7Z6B7 1085 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CDR2LQ86X02 465 aaPredicted RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 THNSL1Q8IYQ7 743 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CEP120Q8N960 986 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 TRPV1Q8NER1 839 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 TRIM58Q8NG06 486 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 HELQQ8TDG4 1101 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 U2AF1L4Q8WU68 220 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 PPP1R13LQ8WUF5 828 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 SHC3Q92529 594 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ERO1AQ96HE7 468 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ANKRD36BP1Q96IX9 119 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CPB2Q96IY4 423 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 KREMEN1Q96MU8 473 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ADPGKQ9BRR6 497 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 PI4K2AQ9BTU6 479 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 MTMR12Q9C0I1 747 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 RPF1Q9H9Y2 349 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 SPC25Q9HBM1 224 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ADAMTS1Q9UHI8 967 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 NAGPAQ9UK23 515 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 CPSF3Q9UKF6 684 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 NENFQ9UMX5 172 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF638Q14966 1978 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 C17orf102A2RUQ5 167 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 MBLAC1A4D2B0 266 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 VNN1O95497 513 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 CLTAP09496 248 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 RARBP10826 455 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 KRT5P13647 590 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 ARF4P18085 180 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 TBXAS1P24557 533 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 APLP1P51693 650 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 NAP1L1P55209 391 aaKnown RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 OSTNP61366 133 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 PURAQ00577 322 aaKnown RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 SP3Q02447 781 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM62Q0P6H9 643 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 NCOA4Q13772 614 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 DSG2Q14126 1118 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 NAB2Q15742 525 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 KIZQ2M2Z5 673 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 DCAF4L1Q3SXM0 396 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 ALKBH5Q6P6C2 394 aaKnown RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM92Q6UXU6 159 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 EFCAB13Q8IY85 973 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 OR5B17Q8NGF7 314 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 KCNV2Q8TDN2 545 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 EPS8L1Q8TE68 723 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 SLC20A1Q8WUM9 679 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 DHX38Q92620 1227 aaKnown RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 NOX5Q96PH1 765 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 OSMRQ99650 979 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 MTG1Q9BT17 334 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 PACSIN1Q9BY11 444 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 GCOM2Q9BZD3 368 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 PTPRHQ9HD43 1115 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 GINS2Q9Y248 185 aa8.69□□□□□ -1.02
PDZRN3-212ENST00000498048 NLRC5Q86WI3 1866 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 FOXN3O00409 490 aaPredicted RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 SEPT4O43236 478 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CTIFO43310 598 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 BUB1O43683 1085 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 KPNA6O60684 536 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 CSDE1O75534 798 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 C4BPAP04003 597 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 HMGCRP04035 888 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 NFICP08651 508 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 H2AFZP0C0S5 128 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 IQCF3P0C7M6 154 aa8.68□□□□□ -1.02
PDZRN3-212ENST00000498048 GNAT1P11488 350 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms